- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.39 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x 8LA: N-[4-chloro-3-(alpha-D-ribofuranosyloxy)phenyl]-N'-{2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}urea(Non-covalent)
8LA.2: 20 residues within 4Å:- Chain A: V.126, T.149, A.150, H.151, S.154, G.156, V.157, T.207, M.288, G.289, M.294, V.311, P.312, E.313
- Chain C: L.50, P.51, A.338, G.341, Y.342
- Ligands: IMP.1
14 PLIP interactions:3 interactions with chain C, 11 interactions with chain A- Hydrophobic interactions: C:P.51, C:A.338, C:Y.342, A:A.150, A:E.313
- Hydrogen bonds: A:T.149, A:T.149, A:A.150, A:H.151, A:H.151, A:S.154, A:V.157, A:E.313, A:E.313
8LA.8: 19 residues within 4Å:- Chain A: V.49, P.51, A.338, G.341, Y.342
- Chain B: V.126, T.149, A.150, H.151, S.154, G.156, V.157, T.207, M.288, G.289, V.311, P.312, E.313
- Ligands: IMP.7
12 PLIP interactions:10 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:A.150, B:E.313, A:P.51, A:Y.342
- Hydrogen bonds: B:T.149, B:A.150, B:H.151, B:H.151, B:S.154, B:V.157, B:E.313, B:E.313
8LA.11: 18 residues within 4Å:- Chain C: T.149, A.150, H.151, S.154, G.156, V.157, T.207, M.288, G.289, V.311, E.313
- Chain D: V.49, L.50, P.51, A.338, G.341, Y.342
- Ligands: IMP.10
11 PLIP interactions:3 interactions with chain D, 8 interactions with chain C- Hydrophobic interactions: D:P.51, D:Y.342
- Halogen bonds: D:V.49
- Hydrogen bonds: C:A.150, C:H.151, C:H.151, C:S.154, C:G.156, C:V.157, C:E.313, C:E.313
8LA.14: 20 residues within 4Å:- Chain B: V.49, L.50, P.51, A.338, G.341, Y.342
- Chain D: V.126, T.149, A.150, H.151, S.154, G.156, V.157, T.207, M.288, G.289, M.294, V.311, E.313
- Ligands: IMP.13
13 PLIP interactions:11 interactions with chain D, 2 interactions with chain B- Hydrophobic interactions: D:A.150, D:E.313, B:P.51, B:Y.342
- Hydrogen bonds: D:T.149, D:T.149, D:A.150, D:H.151, D:S.154, D:G.156, D:V.157, D:E.313, D:E.313
- 4 x K: POTASSIUM ION(Non-covalent)
K.3: 7 residues within 4Å:- Chain A: E.367, S.368, H.369
- Chain B: G.200, P.201, G.202, C.205
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Metal complexes: B:G.200, B:G.202, A:E.367, A:S.368
K.6: 6 residues within 4Å:- Chain A: G.200, G.202, C.205
- Chain C: E.367, S.368, H.369
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain A- Metal complexes: C:E.367, C:S.368, A:G.200, A:C.205
K.9: 8 residues within 4Å:- Chain B: E.367, S.368, H.369, P.370
- Chain D: G.200, P.201, G.202, C.205
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain D- Metal complexes: B:E.367, B:S.368, D:G.200, D:G.202, D:C.205
K.12: 7 residues within 4Å:- Chain C: G.200, P.201, G.202, C.205
- Chain D: E.367, S.368, H.369
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain D- Metal complexes: C:G.200, C:G.202, C:C.205, D:E.367, D:S.368
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase fromBacillus anthracis in the complex with IMP and the inhibitor P178. To Be Published
- Release Date
- 2017-03-08
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.39 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x 8LA: N-[4-chloro-3-(alpha-D-ribofuranosyloxy)phenyl]-N'-{2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}urea(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase fromBacillus anthracis in the complex with IMP and the inhibitor P178. To Be Published
- Release Date
- 2017-03-08
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H