SMTL ID : 5vaz.3 (2 other biounits)

Crystal structure of a DNA primase domain from Pseudomonas aeruginosa

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

15 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Y.47, R.51, R.127, Y.136, D.253 Ligand excluded by PLIP SO4.2: 7 residues within 4Å: Chain A: E.166, M.168, I.184, N.186, L.211, R.265, I.268 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain A: R.240, R.242, P.274 Chain B: M.284, R.321, I.325 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: N.81, R.102 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain A: K.133, P.134, K.135, Y.136 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: D.217, Q.218, E.248 Ligand excluded by PLIP SO4.7: 5 residues within 4Å: Chain B: Y.47, R.51, R.127, K.135, Y.136 Ligand excluded by PLIP SO4.8: 8 residues within 4Å: Chain B: E.166, M.168, I.184, N.186, L.211, R.265, I.268 Ligands: SO4.14 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain A: F.280, R.321, I.325 Chain B: D.288, A.290 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: R.242, T.269 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: P.247, R.267, Q.271 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain B: S.117, R.158, R.202 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain B: R.105, P.140 Ligand excluded by PLIP SO4.14: 6 residues within 4Å: Chain B: G.183, I.184, R.185, N.186, R.265 Ligands: SO4.8 Ligand excluded by PLIP SO4.15: 6 residues within 4Å: Chain B: F.204, R.205, L.206, V.207, P.208, K.239 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a DNA primase domain from Pseudomonas aeruginosa. To Be Published

Release Date

2017-04-05

Peptides

DNA primase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA primase

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