SMTL ID : 5ve4.2 (2 other biounits)

Crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 3 residues within 4Å: Chain A: H.78, H.134, D.153 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.78, A:H.134, A:D.153, H2O.1, H2O.2

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: S.334, R.335, A.336, G.337, G.338, R.339 Ligand excluded by PLIP

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.3: 2 residues within 4Å: Chain A: F.28, Y.35 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.35 pi-Stacking: A:F.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Motl, N. et al., Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation. J. Biol. Chem. (2017)

Release Date

2017-07-19

Peptides

BpPRF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

BpPRF

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