SMTL ID : 5vfp.1

Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x ZN: ZINC ION(Non-covalent)
4 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Zhu, Y. et al., Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome. Nat Commun (2018)
Release Date
2018-07-18
Peptides
Proteasome subunit alpha type-6: AY
Proteasome subunit alpha type-2: BZ
Proteasome subunit alpha type-4: C0
Proteasome subunit alpha type-7: D1
Proteasome subunit alpha type-5: E2
Proteasome subunit alpha type-1: F3
Proteasome subunit alpha type-3: G4
Proteasome subunit beta type-6: H5
Proteasome subunit beta type-7: I6
Proteasome subunit beta type-3: J7
Proteasome subunit beta type-2: K8
Proteasome subunit beta type-5: L9
Proteasome subunit beta type-1: Ma
Proteasome subunit beta type-4: Nb
26S proteasome non-ATPase regulatory subunit 1: O
26S proteasome non-ATPase regulatory subunit 3: P
26S proteasome non-ATPase regulatory subunit 12: Q
26S proteasome non-ATPase regulatory subunit 6: R
26S proteasome non-ATPase regulatory subunit 7: S
26S proteasome non-ATPase regulatory subunit 13: T
26S proteasome non-ATPase regulatory subunit 4: U
26S proteasome non-ATPase regulatory subunit 14: V
26S proteasome non-ATPase regulatory subunit 8: W
sem1: X
26S proteasome non-ATPase regulatory subunit 11: c
26S proteasome regulatory subunit 7: d
26S proteasome regulatory subunit 4: e
26S proteasome regulatory subunit 8: f
26S proteasome regulatory subunit 6B: g
26S proteasome regulatory subunit 10B: h
26S proteasome regulatory subunit 6A: i
26S proteasome non-ATPase regulatory subunit 2: j
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
Y
g
B
H
Z
h
C
I
0
i
D
J
1
j
E
K
2
k
F
L
3
l
G
M
4
m
H
N
5
n
I
O
6
o
J
P
7
p
K
Q
8
q
L
R
9
r
M
S
a
s
N
T
b
t
O
U
P
V
Q
W
R
Y
S
Z
T
a
U
b
V
c
W
d
X
e
c
X
d
A
e
B
f
C
g
D
h
E
i
F
j
f

Proteasome subunit alpha type-6

Proteasome subunit alpha type-2

Proteasome subunit alpha type-4

Proteasome subunit alpha type-7

Toggle Identical (D1)

Proteasome subunit alpha type-5

Toggle Identical (E2)

Proteasome subunit alpha type-1

Toggle Identical (F3)

Proteasome subunit alpha type-3

Toggle Identical (G4)

Proteasome subunit beta type-6

Toggle Identical (H5)

Proteasome subunit beta type-7

Toggle Identical (I6)

Proteasome subunit beta type-3

Toggle Identical (J7)

Proteasome subunit beta type-2

Toggle Identical (K8)

Proteasome subunit beta type-5

Toggle Identical (L9)

Proteasome subunit beta type-1

Toggle Identical (Ma)

Proteasome subunit beta type-4

Toggle Identical (Nb)

26S proteasome non-ATPase regulatory subunit 1

26S proteasome non-ATPase regulatory subunit 3

26S proteasome non-ATPase regulatory subunit 12

26S proteasome non-ATPase regulatory subunit 6

26S proteasome non-ATPase regulatory subunit 7

26S proteasome non-ATPase regulatory subunit 13

26S proteasome non-ATPase regulatory subunit 4

26S proteasome non-ATPase regulatory subunit 14

26S proteasome non-ATPase regulatory subunit 8

sem1

26S proteasome non-ATPase regulatory subunit 11

26S proteasome regulatory subunit 7

26S proteasome regulatory subunit 4

26S proteasome regulatory subunit 8

26S proteasome regulatory subunit 6B

26S proteasome regulatory subunit 10B

26S proteasome regulatory subunit 6A

26S proteasome non-ATPase regulatory subunit 2

Related Entries With Identical Sequence

1iru.1 | 4r3o.1 | 4r67.1 | 4r67.2 | 5a0q.1 | 5gjq.1 | 5gjr.9 | 5gjr.18 | 5gjr.55 | 5gjr.64 | 5l4k.1 | 5le5.1 | 5lex.1 | 5ley.1 | 5lez.1 | 5lf0.1 | 5lf1.1 | 5lf3.1 | 5lf4.1 | 5lf6.1 | 5lf7.1 | 5ln3.1 | 5m32.1 | 5t0c.3 | 5t0c.10 | 5t0c.12 | 5t0c.28 | 5t0c.35 | 5t0c.42 | 5t0c.44  more...