SMTL ID : 5vgb.1

Crystal structure of NmeCas9 HNH domain bound to anti-CRISPR AcrIIC1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: K.38, L.41, K.90 Chain B: C.17, D.46 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:C.17, A:K.90 GOL.2: 3 residues within 4Å: Chain A: R.81, T.82, W.83 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.82 GOL.4: 4 residues within 4Å: Chain B: G.9, K.10, N.11, E.28 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.10, B:N.11, B:N.11, B:E.28

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.9, S.86, N.88, R.138 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.86, A:S.86, A:N.88 Water bridges: A:R.9, A:R.9 Salt bridges: A:R.9, A:R.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harrington, L.B. et al., A Broad-Spectrum Inhibitor of CRISPR-Cas9. Cell (2017)

Release Date

2017-08-30

Peptides

CRISPR-associated endonuclease Cas9: A
Anti-CRISPR protein (AcrIIC1): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CRISPR-associated endonuclease Cas9

Anti-CRISPR protein (AcrIIC1)

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