SMTL ID : 5vj4.1

Crystal structure of a putative surface protein encoded by BTA121

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

13 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.102, I.103, D.104, Q.128, S.133 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.103, A:D.104, A:Q.128, A:S.133, A:S.133 SO4.2: 7 residues within 4Å: Chain A: I.205, G.206, T.207, D.208, R.209, R.349 Ligands: SO4.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.206, A:D.208, A:D.208, A:D.208, A:R.209 Salt bridges: A:R.349 SO4.3: 4 residues within 4Å: Chain A: K.223, D.242, A.243, R.246 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.243 Salt bridges: A:K.223, A:R.246 SO4.4: 5 residues within 4Å: Chain A: R.139, L.143, G.206, T.207 Ligands: SO4.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.207, A:T.207 Salt bridges: A:R.139 SO4.5: 6 residues within 4Å: Chain A: R.280, M.342, T.343, D.344, G.345, D.346 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.280, A:T.343, A:D.344, A:G.345, A:D.346 SO4.6: 3 residues within 4Å: Chain A: N.230, P.231, R.232 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.230, A:R.232 Salt bridges: A:R.232 SO4.7: 3 residues within 4Å: Chain A: R.181 Chain B: R.181, R.188 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Salt bridges: B:R.181, B:R.188, A:R.181 SO4.8: 4 residues within 4Å: Chain B: K.223, D.242, A.243, R.246 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.243 Salt bridges: B:K.223, B:R.246 SO4.9: 6 residues within 4Å: Chain B: T.101, V.102, I.103, D.104, Q.128, S.133 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.103, B:D.104, B:Q.128 SO4.10: 4 residues within 4Å: Chain B: M.342, T.343, D.344, G.345 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.343, B:D.344, B:G.345 Water bridges: B:R.280 SO4.11: 6 residues within 4Å: Chain B: I.205, G.206, T.207, D.208, R.209, R.349 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.206, B:G.206, B:D.208, B:R.209 Salt bridges: B:R.349 SO4.12: 5 residues within 4Å: Chain B: R.139, L.143, F.200, G.206, T.207 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.207, B:T.207 Salt bridges: B:R.139 SO4.13: 3 residues within 4Å: Chain B: N.230, P.231, R.232 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.230, B:R.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luo, Z. et al., Crystal Structure of Borrelia turicatae protein, BTA121, a differentially regulated gene in the tick-mammalian transmission cycle of relapsing fever spirochetes. Sci Rep (2017)

Release Date

2017-11-29

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein