SMTL ID : 5w1e.1

PobR in complex with PHB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.39, A.42, R.45, R.72 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.39 Water bridges: A:S.39 Salt bridges: A:R.45, A:R.72

1 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)

PHB.2: 12 residues within 4Å: Chain A: S.113, F.124, Q.127, R.132, F.138, T.149, A.150, P.151, D.210, A.220, S.238, V.240 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.124, A:A.220, A:V.240 Hydrogen bonds: A:S.113, A:Q.127, A:A.150 Water bridges: A:R.132, A:R.132, A:R.132, A:R.132 Salt bridges: A:R.132

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: R.123, R.139, D.142, L.143, A.182, S.366, P.370 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.123, A:R.123, A:R.139, A:D.142, A:L.143, A:L.143 GOL.4: 4 residues within 4Å: Chain A: Y.87, L.91, T.359, L.360 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.359, A:L.360 Water bridges: A:T.359

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, R. et al., A peculiar IclR family transcription factor regulates para-hydroxybenzoate catabolism in Streptomyces coelicolor. Nucleic Acids Res. (2018)

Release Date

2017-12-13

Peptides

Putative transcriptional regulator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative transcriptional regulator