SMTL ID : 5w7q.1

Crystal Structure of Reconstructed Bacterial Elongation Factor Node 168

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.19, Y.40, D.44 Ligands: GDP.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.19, H2O.1, H2O.1, H2O.1

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 17 residues within 4Å: Chain A: H.13, V.14, D.15, H.16, G.17, K.18, T.19, T.20, Y.40, N.129, K.130, D.132, M.133, S.167, A.168, L.169 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:D.15, A:D.15, A:H.16, A:G.17, A:K.18, A:T.19, A:T.20, A:T.20, A:Y.40, A:N.129, A:K.130, A:K.130, A:S.167, A:S.167, A:A.168, A:L.169 Water bridges: A:T.19 Salt bridges: A:K.18, A:D.132 pi-Cation interactions: A:K.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okafor, C.D. et al., Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus. Structure (2018)

Release Date

2018-04-25

Peptides

Consensus Elongation Factor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Consensus Elongation Factor