SMTL ID : 5x6e.3 (2 other biounits)

Crystal structure of PrfA-DNA binary complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.99 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 12 residues within 4Å: Chain A: Q.61, Y.62, Y.63, K.64, A.66, F.67, K.122, Q.123, Y.126, Q.146, I.149, W.224 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.67 Hydrogen bonds: A:Q.61, A:Y.62, A:Y.62, A:K.64, A:K.64, A:A.66, A:Q.146 Salt bridges: A:K.122, A:K.130 GSH.2: 15 residues within 4Å: Chain B: Q.61, Y.62, Y.63, K.64, A.66, F.67, K.122, Q.123, Y.126, Q.146, I.149, L.150, Y.154, C.229, T.232 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:F.67 Hydrogen bonds: B:Y.62, B:Y.62, B:K.64, B:K.64, B:A.66, B:Y.126, B:Q.146 Salt bridges: B:K.122, B:K.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes. Protein Cell (2017)

Release Date

2017-04-12

Peptides

Listeriolysin positive regulatory factor A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Listeriolysin positive regulatory factor A

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