SMTL ID : 5x70.1 (1 other biounit)

Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x G- G- C: RNA (5'-R(P*GP*GP*CP*AP*AP*A)-3')(Non-covalent)

G-G-C.1: 18 residues within 4Å: Chain A: Y.76, R.80, K.630, H.644, E.645, Y.648, R.651, H.707, N.750, W.761, H.762 Chain B: K.49, Y.50, D.53, M.56, S.57, E.137, V.140 Protein-ligand interaction information (PLIP) not available G-G-C.2: 7 residues within 4Å: Chain A: D.53, M.56, V.140 Chain B: Y.76, R.80, H.644, E.645 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakamichi, Y. et al., Crystal structure of capping enzyme from Rice dwarf virus. To Be Published

Release Date

2018-02-28

Peptides

mRNA capping enzyme P5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

mRNA capping enzyme P5

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