SMTL ID : 5xf4.1

Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having a 1,2-diphenylethylenediamine linker (S,S-configuration)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.87 Å
Oligo State
hetero-2-2-2-2-mer
Ligands
1 x MG: MAGNESIUM ION(Non-covalent)
2 x RUD: [ethane6-3-(p-tolyl)propanoic acid]Ru(1,3,5-triaza-7-phosphaadamantane)Cl2(Non-covalent)
1 x SSK: (1S,2S)-1,2-diphenylethane-1,2-diamine(Non-covalent)
1 x SO4: SULFATE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Davey, G.E. et al., Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation. Nat Commun (2017)
Release Date
2017-10-11
Peptides
Histone H3.1: AE
Histone H4: BF
Histone H2A type 1-B/E: CG
Histone H2B type 1-J: DH
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
E
E
B
B
F
F
C
C
G
G
D
D
H
H

Histone H3.1

Histone H4

Histone H2A type 1-B/E

Toggle Identical (CG)

Histone H2B type 1-J

Toggle Identical (DH)

Related Entries With Identical Sequence

1eqz.1 | 1f66.1 | 1hq3.1 | 1tzy.1 | 1u35.1 | 2aro.1 | 2cv5.1 | 2f8n.1 | 3nqu.1 | 3r45.1 | 4hga.1 | 4kgc.1 | 4ld9.1 | 4z2m.1 | 4zux.1 | 4zux.2 | 5c3i.1 | 5c3i.2 | 5c3i.3 | 5c3i.4 | 5c3i.5 | 5c3i.6 | 5e5a.1 | 5kgf.1 | 5o9g.1 | 5omx.1 | 5ong.1 | 5onw.1 | 5x0x.1 | 5xf3.1  more...