SMTL ID : 5xhj.2 (1 other biounit)

Crystal Structure of P450BM3 with 5-Cyclohexylvaleroyl-L-Tryptophan

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: K.70, L.76, L.87, F.88, W.97, F.108, I.154, F.262, A.265, G.266, T.269, T.270, L.273, T.328, A.329, F.332, P.393, F.394, G.395, R.399, A.400, C.401, I.402, G.403, F.406, A.407 24 PLIP interactions: 23 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:L.87, A:F.88, A:F.88, A:F.88, A:F.108, A:I.154, A:F.262, A:F.262, A:A.265, A:L.273, A:A.329, A:F.394, A:I.402, A:F.406 Hydrogen bonds: A:R.399 Water bridges: A:K.70, A:K.70, A:S.333, A:S.333, A:S.333 Salt bridges: A:K.70, A:R.399 Metal complexes: A:C.401, H2O.8

1 x TRP: TRYPTOPHAN(Non-covalent)

TRP.2: 11 residues within 4Å: Chain A: L.21, F.43, A.45, R.48, T.50, Y.52, S.73, Q.74, A.75, L.189 Ligands: 87X.3 9 PLIP interactions: 8 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:L.21, A:F.43, A:A.45, A:R.48, A:T.50 Hydrogen bonds: A:Y.52, A:Q.74, A:A.75, W.2

1 x 87X: 5-cyclohexylpentanoic acid(Non-covalent)

87X.3: 7 residues within 4Å: Chain A: V.27, L.30, Y.52, P.330, A.331, L.438 Ligands: TRP.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.27 Hydrogen bonds: A:Y.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suzuki, K. et al., Control of stereoselectivity of benzylic hydroxylation catalysed by wild-type cytochrome P450BM3 using decoy molecules. CATALYSIS SCIENCE AND TECHNOLOGY (2017)

Release Date

2017-12-06

Peptides

Bifunctional cytochrome P450/NADPH--P450 reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bifunctional cytochrome P450/NADPH--P450 reductase

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