SMTL ID : 5yel.2 (1 other biounit)

Crystal structure of CTCF ZFs6-11-gb7CSE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.96 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.5, C.8, H.21, H.26 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:H.21, A:H.26 ZN.2: 4 residues within 4Å: Chain A: C.35, C.38, H.51, H.56 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.35, A:C.38, A:H.51, A:H.56 ZN.3: 4 residues within 4Å: Chain A: C.65, C.68, H.81, H.85 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.65, A:C.68, A:H.81, A:H.85 ZN.4: 4 residues within 4Å: Chain A: C.93, C.96, H.109, H.113 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.93, A:C.96, A:H.109, A:H.113 ZN.5: 4 residues within 4Å: Chain A: C.121, C.124, H.137, H.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.121, A:C.124, A:H.137, A:H.142 ZN.6: 5 residues within 4Å: Chain A: C.153, C.156, K.158, H.169, C.173 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.153, A:C.156, A:H.169, A:C.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yin, M. et al., Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites. Cell Res. (2017)

Release Date

2017-11-29

Peptides

Transcriptional repressor CTCF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcriptional repressor CTCF

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