SMTL ID : 5yjs.2 (1 other biounit)

Structure of vicilin from Capsicum annuum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

monomer

Ligands

1 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)

SAL.1: 12 residues within 4Å: Chain A: F.218, G.237, M.239, Y.250, N.252, R.257, V.259, F.323, M.333, V.334, G.335, K.345 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.218, A:M.239, A:V.259 Hydrogen bonds: A:Y.250, A:Y.250, A:Y.250, A:N.252 Salt bridges: A:R.257, A:K.345

1 x CU1: COPPER (I) ION(Non-covalent)

CU1.2: 5 residues within 4Å: Chain A: Y.3, C.272, P.273, H.274, H.319 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.272, A:H.274, A:H.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shikhi, M. et al., Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress. Biochem. J. (2018)

Release Date

2018-10-10

Peptides

vicilin-like antimicrobial peptides 2-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

vicilin-like antimicrobial peptides 2-2

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