- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 4 x OXM: OXAMIC ACID(Non-covalent)
OXM.2: 8 residues within 4Å:- Chain A: C.102, A.103, G.104, Y.125, R.260, H.321, Y.324
- Ligands: NAI.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:A.103, A:G.104, A:Y.125, A:R.260, A:R.260, A:H.321
- Salt bridges: A:R.260
OXM.4: 8 residues within 4Å:- Chain B: C.102, A.103, G.104, Y.125, R.260, H.321, Y.324
- Ligands: NAI.3
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:A.103, B:G.104, B:Y.125, B:Y.125, B:R.260, B:R.260, B:H.321
- Salt bridges: B:R.260
OXM.6: 8 residues within 4Å:- Chain C: C.102, A.103, G.104, Y.125, R.260, H.321, Y.324
- Ligands: NAI.5
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:A.103, C:G.104, C:Y.125, C:Y.125, C:R.260, C:R.260
- Salt bridges: C:R.260
OXM.8: 8 residues within 4Å:- Chain D: C.102, A.103, G.104, Y.125, R.260, H.321, Y.324
- Ligands: NAI.7
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:A.103, D:G.104, D:Y.125, D:Y.125, D:R.260, D:R.260
- Salt bridges: D:R.260
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Furukawa, N. et al., Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry (2018)
- Release Date
- 2018-09-19
- Peptides
- D-lactate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 4 x OXM: OXAMIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Furukawa, N. et al., Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry (2018)
- Release Date
- 2018-09-19
- Peptides
- D-lactate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D