- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x PDC: PYRIDINE-2,6-DICARBOXYLIC ACID(Non-covalent)
PDC.2: 12 residues within 4Å:- Chain A: T.101, P.126, N.127, H.155, H.156, K.159, S.164, G.165, T.166, A.215, F.240
- Ligands: NAP.1
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:A.215, A:F.240
- Hydrogen bonds: A:K.159, A:G.165, A:T.166, A:T.166, A:T.166
- Water bridges: A:N.127, A:R.237
- Salt bridges: A:H.155, A:H.155, A:H.156, A:K.159, A:K.159
- pi-Cation interactions: A:H.155
PDC.4: 12 residues within 4Å:- Chain B: T.101, P.126, N.127, H.155, H.156, K.159, S.164, G.165, T.166, A.215, F.240
- Ligands: NAP.3
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:A.215, B:F.240
- Hydrogen bonds: B:K.159, B:G.165, B:T.166, B:T.166, B:T.166
- Water bridges: B:N.127, B:R.237
- Salt bridges: B:H.155, B:H.155, B:H.156, B:K.159, B:K.159
- pi-Cation interactions: B:H.155
PDC.6: 12 residues within 4Å:- Chain C: T.101, P.126, N.127, H.155, H.156, K.159, S.164, G.165, T.166, A.215, F.240
- Ligands: NAP.5
15 PLIP interactions:15 interactions with chain C- Hydrophobic interactions: C:A.215, C:F.240
- Hydrogen bonds: C:T.101, C:K.159, C:G.165, C:T.166, C:T.166
- Water bridges: C:N.127, C:R.237
- Salt bridges: C:H.155, C:H.155, C:H.156, C:K.159, C:K.159
- pi-Cation interactions: C:H.155
PDC.8: 12 residues within 4Å:- Chain D: T.101, P.126, N.127, H.155, H.156, K.159, S.164, G.165, T.166, A.215, F.240
- Ligands: NAP.7
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:A.215, D:F.240
- Hydrogen bonds: D:T.101, D:K.159, D:G.165, D:T.166, D:T.166
- Water bridges: D:N.127, D:R.237
- Salt bridges: D:H.155, D:H.155, D:H.156, D:K.159, D:K.159
- pi-Cation interactions: D:H.155
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, C.W. et al., Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor. Sci Rep (2018)
- Release Date
- 2018-06-27
- Peptides
- Dihydrodipicolinate reductase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x PDC: PYRIDINE-2,6-DICARBOXYLIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, C.W. et al., Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor. Sci Rep (2018)
- Release Date
- 2018-06-27
- Peptides
- Dihydrodipicolinate reductase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A