SMTL ID : 5z9s.1

Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.1: 14 residues within 4Å: Chain A: L.67, H.68, D.96, F.145, R.159, K.202, H.203, M.246, Y.249, D.281, W.282, M.314, W.422, E.524 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.68, A:R.159, A:R.159, A:K.202, A:H.203, A:H.203, A:Y.249, A:E.524 BGC.2: 14 residues within 4Å: Chain B: L.67, H.68, D.96, F.145, R.159, K.202, H.203, M.246, Y.249, D.281, W.282, M.314, W.422, E.524 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:H.68, B:R.159, B:R.159, B:K.202, B:H.203, B:H.203, B:Y.249, B:E.524

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, S. et al., Functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria. Biochem. Biophys. Res. Commun. (2018)

Release Date

2018-03-14

Peptides

Glycosyl hydrolase family 3 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glycosyl hydrolase family 3 protein