- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CA: CALCIUM ION(Non-covalent)
- 15 x SM: SAMARIUM (III) ION(Non-covalent)(Non-functional Binders)
SM.3: 3 residues within 4Å:- Chain A: N.236, E.238, E.250
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.238, A:E.250, A:E.250, H2O.1, H2O.1
SM.4: 3 residues within 4Å:- Chain A: E.119, G.156, E.161
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.119, A:E.119, A:G.156, A:E.161, A:E.161
SM.5: 1 residues within 4Å:- Chain A: E.154
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:E.154, A:E.154, H2O.1, H2O.1, H2O.2
SM.6: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)SM.7: 1 residues within 4Å:- Chain A: E.37
No protein-ligand interaction detected (PLIP)SM.10: 3 residues within 4Å:- Chain B: N.236, E.238, E.250
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:E.238, B:E.250, H2O.2, H2O.2, H2O.3
SM.11: 3 residues within 4Å:- Chain B: E.119, G.156, E.161
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:E.119, B:E.119, B:G.156, B:E.161
SM.12: 1 residues within 4Å:- Chain B: E.154
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.154, B:E.154, H2O.2, H2O.2
SM.13: 1 residues within 4Å:- Chain B: E.37
No protein-ligand interaction detected (PLIP)SM.14: 2 residues within 4Å:- Chain B: E.37, D.38
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:E.37
SM.17: 3 residues within 4Å:- Chain C: N.236, E.238, E.250
5 PLIP interactions:2 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: C:E.238, C:E.250, H2O.3, H2O.3, H2O.4
SM.18: 3 residues within 4Å:- Chain C: E.119, G.156, E.161
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:E.119, C:E.119, C:G.156, C:E.161
SM.19: 1 residues within 4Å:- Chain C: E.154
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:E.154, C:E.154, H2O.4
SM.20: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)SM.21: 2 residues within 4Å:- Chain C: E.37, D.38
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:E.37, C:E.37
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kozak, J.J. et al., Structural stabilities of calcium proteins: Human intelectin-1 and frog lectin XEEL. J. Inorg. Biochem. (2018)
- Release Date
- 2018-06-06
- Peptides
- Xenopus Embryonic Epidermal Lectin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CA: CALCIUM ION(Non-covalent)
- 15 x SM: SAMARIUM (III) ION(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kozak, J.J. et al., Structural stabilities of calcium proteins: Human intelectin-1 and frog lectin XEEL. J. Inorg. Biochem. (2018)
- Release Date
- 2018-06-06
- Peptides
- Xenopus Embryonic Epidermal Lectin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C