- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CIT: CITRIC ACID(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 8 residues within 4Å:- Chain A: F.61, Y.63, Y.78, W.79, G.80, Y.169, R.469, V.472
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.80, A:R.469, A:R.469, A:N.471
GOL.3: 6 residues within 4Å:- Chain A: P.359, G.360, F.361, E.365, P.372, N.374
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:P.359, A:E.365, A:N.374, A:N.374
GOL.4: 4 residues within 4Å:- Chain A: G.24, E.25, K.26, K.27
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.26, A:K.27
GOL.5: 4 residues within 4Å:- Chain A: Y.175, V.176, V.178, N.199
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.176, A:V.176
GOL.10: 5 residues within 4Å:- Chain B: R.15, K.19, Y.123, K.126, H.127
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.15, B:R.15, B:K.126, B:K.126
- Water bridges: B:E.122
GOL.11: 5 residues within 4Å:- Chain B: G.360, F.361, E.365, P.372, N.374
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.365, B:N.374
GOL.12: 4 residues within 4Å:- Chain B: K.196
- Chain C: L.192, E.193, K.196
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:E.193, C:E.193, B:K.196, B:K.196
GOL.13: 9 residues within 4Å:- Chain B: F.61, Y.63, D.68, Y.78, W.79, G.80, Y.169, R.469, V.472
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.80, B:Y.169, B:R.469, B:R.469, B:V.472
GOL.18: 4 residues within 4Å:- Chain C: Q.194, H.198, K.201, G.299
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.194, C:G.299
GOL.19: 7 residues within 4Å:- Chain C: Q.436, Q.438, H.509, R.510, G.511, G.512, A.521
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:Q.438, C:R.510, C:G.512
GOL.24: 4 residues within 4Å:- Chain D: G.24, E.25, K.26, K.27
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:K.26, D:K.26, D:K.27
GOL.25: 5 residues within 4Å:- Chain D: G.360, F.361, E.365, P.372, N.374
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:N.374
- Water bridges: D:N.374
GOL.26: 6 residues within 4Å:- Chain D: F.51, P.60, A.157, L.158, S.159, R.161
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:S.159
GOL.27: 5 residues within 4Å:- Chain D: P.172, K.173, G.174, Y.175, V.176
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:V.176
- 8 x CU: COPPER (II) ION(Non-covalent)
CU.6: 5 residues within 4Å:- Chain A: H.57, C.83, H.85, H.94
- Ligands: O.8
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Ligand interactions- Metal complexes: A:H.57, A:H.85, A:H.94, O.8
CU.7: 5 residues within 4Å:- Chain A: H.277, H.281, F.316, H.320
- Ligands: O.8
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Ligand interactions- Metal complexes: A:H.277, A:H.281, A:H.320, O.8
CU.14: 6 residues within 4Å:- Chain B: H.277, H.281, F.316, H.319, H.320
- Ligands: O.16
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.277, B:H.281, B:H.320, B:H.320
CU.15: 6 residues within 4Å:- Chain B: H.57, C.83, H.85, H.94, F.316
- Ligands: O.16
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.57, B:H.85, B:H.94
CU.20: 6 residues within 4Å:- Chain C: H.277, H.281, F.316, H.319, H.320
- Ligands: O.22
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Ligand interactions- Metal complexes: C:H.277, C:H.281, C:H.320, O.22
CU.21: 6 residues within 4Å:- Chain C: H.57, C.83, H.85, H.94, F.316
- Ligands: O.22
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Ligand interactions- Metal complexes: C:H.57, C:H.85, C:H.94, O.22
CU.28: 6 residues within 4Å:- Chain D: H.57, C.83, H.85, H.94, F.316
- Ligands: O.30
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Ligand interactions- Metal complexes: D:H.57, D:H.85, D:H.94, O.30
CU.29: 6 residues within 4Å:- Chain D: H.277, H.281, F.316, H.319, H.320
- Ligands: O.30
3 PLIP interactions:2 interactions with chain D, 1 Ligand-Ligand interactions- Metal complexes: D:H.281, D:H.320, O.30
- 4 x O: OXYGEN ATOM(Non-covalent)
O.8: 11 residues within 4Å:- Chain A: H.57, H.85, H.94, H.277, H.281, N.307, F.316, H.320, L.467
- Ligands: CU.6, CU.7
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.307
O.16: 10 residues within 4Å:- Chain B: H.57, H.85, H.94, H.277, H.281, N.307, F.316, H.320
- Ligands: CU.14, CU.15
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:H.277, B:N.307
O.22: 9 residues within 4Å:- Chain C: H.57, H.85, H.94, H.277, H.281, N.307, H.320
- Ligands: CU.20, CU.21
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:N.307, C:H.320
O.30: 10 residues within 4Å:- Chain D: H.57, H.85, H.94, H.277, H.281, N.307, H.320, L.467
- Ligands: CU.28, CU.29
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:H.57, D:H.277, D:N.307
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Son, H.F. et al., Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis. Acs Catalysis (2018)
- Release Date
- 2018-10-31
- Peptides
- Tyrosinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CIT: CITRIC ACID(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- 8 x CU: COPPER (II) ION(Non-covalent)
- 4 x O: OXYGEN ATOM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Son, H.F. et al., Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis. Acs Catalysis (2018)
- Release Date
- 2018-10-31
- Peptides
- Tyrosinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D