SMTL ID : 5zw6.1

Structure of spAimR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x GLY- MET- PRO- ARG- GLY- ALA: GLY-MET-PRO-ARG-GLY-ALA(Non-covalent)

GLY-MET-PRO-ARG-GLY-ALA.1: 25 residues within 4Å: Chain A: Y.159, L.162, F.167, V.198, L.199, N.202, N.206, R.228, F.229, F.232, L.235, T.236, N.239, L.242, I.269, Q.272, A.273, F.276, M.296, Q.299, E.300, N.329, D.360, F.362, L.363 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.162, A:V.198, A:L.199, A:Q.272, A:A.273, A:F.276 Hydrogen bonds: A:N.202, A:N.202, A:N.206, A:N.239, A:Q.299, A:N.329 Water bridges: A:N.206, A:Q.299 Salt bridges: A:R.228, A:D.360 GLY-MET-PRO-ARG-GLY-ALA.2: 25 residues within 4Å: Chain B: Y.159, L.162, F.167, V.198, L.199, N.202, N.206, R.228, F.229, F.232, L.235, T.236, N.239, L.242, I.269, Q.272, A.273, F.276, M.296, Q.299, E.300, N.329, D.360, F.362, L.363 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:Y.159, B:L.162, B:V.198, B:L.199, B:Q.272, B:A.273, B:F.276 Hydrogen bonds: B:N.202, B:N.206, B:T.236, B:N.239, B:Q.299, B:E.300, B:N.329 Water bridges: B:N.202, B:N.206, B:F.276 Salt bridges: B:R.228, B:D.360

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dou, C. et al., Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities. Nat Microbiol (2018)

Release Date

2018-09-05

Peptides

AimR transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AimR transcriptional regulator