SMTL ID : 6a4u.1

The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.16 Å

Oligo State

homo-24-mer

Ligands

200 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.4 Ligand excluded by PLIP EDO.2: 5 residues within 4Å: Chain A: K.150, F.164, E.167, L.168 Chain B: Y.162 Ligand excluded by PLIP EDO.3: 5 residues within 4Å: Chain A: Y.162 Chain T: K.150, F.164, E.167, L.168 Ligand excluded by PLIP EDO.4: 7 residues within 4Å: Chain A: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.1, EDO.7 Ligand excluded by PLIP EDO.5: 7 residues within 4Å: Chain A: Y.36, L.44, G.90, T.91, G.92, E.161 Chain T: R.153 Ligand excluded by PLIP EDO.6: 4 residues within 4Å: Chain A: N.17, K.18, V.77, Q.79 Ligand excluded by PLIP EDO.7: 6 residues within 4Å: Chain A: K.49, F.50, E.53, L.168, N.169 Ligands: EDO.4 Ligand excluded by PLIP EDO.12: 8 residues within 4Å: Chain B: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.13 Ligand excluded by PLIP EDO.13: 5 residues within 4Å: Chain B: F.50, E.53, S.54, K.143 Ligands: EDO.12 Ligand excluded by PLIP EDO.14: 3 residues within 4Å: Chain B: K.142, D.146 Chain K: E.38 Ligand excluded by PLIP EDO.15: 7 residues within 4Å: Chain B: A.154, G.155, T.157, G.158, L.159, G.160 Ligands: EDO.18 Ligand excluded by PLIP EDO.16: 3 residues within 4Å: Chain A: K.142, D.146 Chain B: E.38 Ligand excluded by PLIP EDO.17: 8 residues within 4Å: Chain A: R.153 Chain B: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.18: 6 residues within 4Å: Chain B: R.153, A.154 Chain K: T.157, G.158, L.159 Ligands: EDO.15 Ligand excluded by PLIP EDO.19: 6 residues within 4Å: Chain B: M.147, K.150, F.164, E.167 Chain K: Y.162 Ligands: EDO.131 Ligand excluded by PLIP EDO.20: 4 residues within 4Å: Chain B: N.7, Y.8, H.9, N.120 Ligand excluded by PLIP EDO.21: 3 residues within 4Å: Chain L: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.25: 8 residues within 4Å: Chain C: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.27 Ligand excluded by PLIP EDO.26: 3 residues within 4Å: Chain C: K.142, D.146 Chain V: E.38 Ligand excluded by PLIP EDO.27: 5 residues within 4Å: Chain C: F.50, E.53, S.54, K.143 Ligands: EDO.25 Ligand excluded by PLIP EDO.28: 6 residues within 4Å: Chain C: L.111, H.114, S.115, S.118 Chain U: N.121, P.123 Ligand excluded by PLIP EDO.29: 2 residues within 4Å: Chain C: Y.25, A.82 Ligand excluded by PLIP EDO.30: 8 residues within 4Å: Chain C: D.41, V.42, L.44, W.89, G.90, T.91, E.161 Chain N: R.153 Ligand excluded by PLIP EDO.31: 4 residues within 4Å: Chain C: K.150, F.164, E.167 Chain V: Y.162 Ligand excluded by PLIP EDO.32: 5 residues within 4Å: Chain A: R.39, D.41 Chain C: A.1, S.2, R.75 Ligand excluded by PLIP EDO.33: 4 residues within 4Å: Chain C: E.10, D.11, A.14 Ligands: EDO.34 Ligand excluded by PLIP EDO.34: 5 residues within 4Å: Chain C: D.11, A.14, S.15, T.116 Ligands: EDO.33 Ligand excluded by PLIP EDO.35: 5 residues within 4Å: Chain C: Y.162, K.166 Chain N: K.150, E.167 Ligands: EDO.163 Ligand excluded by PLIP EDO.36: 3 residues within 4Å: Chain C: Y.25, V.29, L.102 Ligand excluded by PLIP EDO.39: 7 residues within 4Å: Chain D: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligand excluded by PLIP EDO.40: 3 residues within 4Å: Chain D: K.142, D.146 Chain P: E.38 Ligand excluded by PLIP EDO.41: 5 residues within 4Å: Chain D: F.50, E.53, S.54, E.57, K.143 Ligand excluded by PLIP EDO.42: 6 residues within 4Å: Chain D: L.111, H.114, S.115, S.118 Chain N: N.121, P.123 Ligand excluded by PLIP EDO.43: 4 residues within 4Å: Chain D: Y.162 Chain L: K.150, F.164, E.167 Ligand excluded by PLIP EDO.44: 4 residues within 4Å: Chain D: A.14, N.17, V.77, Q.79 Ligand excluded by PLIP EDO.45: 9 residues within 4Å: Chain D: Y.36, D.41, V.42, L.44, G.90, T.91, G.92, E.161 Chain L: R.153 Ligand excluded by PLIP EDO.49: 8 residues within 4Å: Chain E: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.52 Ligand excluded by PLIP EDO.50: 5 residues within 4Å: Chain E: K.150, F.164, E.167, L.168 Chain F: Y.162 Ligand excluded by PLIP EDO.51: 5 residues within 4Å: Chain E: Y.162 Chain R: K.150, F.164, E.167, L.168 Ligand excluded by PLIP EDO.52: 7 residues within 4Å: Chain E: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.49, EDO.55 Ligand excluded by PLIP EDO.53: 7 residues within 4Å: Chain E: Y.36, L.44, G.90, T.91, G.92, E.161 Chain R: R.153 Ligand excluded by PLIP EDO.54: 4 residues within 4Å: Chain E: N.17, K.18, V.77, Q.79 Ligand excluded by PLIP EDO.55: 6 residues within 4Å: Chain E: K.49, F.50, E.53, L.168, N.169 Ligands: EDO.52 Ligand excluded by PLIP EDO.60: 8 residues within 4Å: Chain F: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.61 Ligand excluded by PLIP EDO.61: 5 residues within 4Å: Chain F: F.50, E.53, S.54, K.143 Ligands: EDO.60 Ligand excluded by PLIP EDO.62: 3 residues within 4Å: Chain F: K.142, D.146 Chain O: E.38 Ligand excluded by PLIP EDO.63: 7 residues within 4Å: Chain F: A.154, G.155, T.157, G.158, L.159, G.160 Ligands: EDO.66 Ligand excluded by PLIP EDO.64: 3 residues within 4Å: Chain E: K.142, D.146 Chain F: E.38 Ligand excluded by PLIP EDO.65: 8 residues within 4Å: Chain E: R.153 Chain F: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.66: 6 residues within 4Å: Chain F: R.153, A.154 Chain O: T.157, G.158, L.159 Ligands: EDO.63 Ligand excluded by PLIP EDO.67: 6 residues within 4Å: Chain F: M.147, K.150, F.164, E.167 Chain O: Y.162 Ligands: EDO.179 Ligand excluded by PLIP EDO.68: 4 residues within 4Å: Chain F: N.7, Y.8, H.9, N.120 Ligand excluded by PLIP EDO.69: 3 residues within 4Å: Chain P: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.73: 8 residues within 4Å: Chain G: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.75 Ligand excluded by PLIP EDO.74: 3 residues within 4Å: Chain G: K.142, D.146 Chain X: E.38 Ligand excluded by PLIP EDO.75: 5 residues within 4Å: Chain G: F.50, E.53, S.54, K.143 Ligands: EDO.73 Ligand excluded by PLIP EDO.76: 6 residues within 4Å: Chain G: L.111, H.114, S.115, S.118 Chain W: N.121, P.123 Ligand excluded by PLIP EDO.77: 2 residues within 4Å: Chain G: Y.25, A.82 Ligand excluded by PLIP EDO.78: 8 residues within 4Å: Chain G: D.41, V.42, L.44, W.89, G.90, T.91, E.161 Chain J: R.153 Ligand excluded by PLIP EDO.79: 4 residues within 4Å: Chain G: K.150, F.164, E.167 Chain X: Y.162 Ligand excluded by PLIP EDO.80: 5 residues within 4Å: Chain E: R.39, D.41 Chain G: A.1, S.2, R.75 Ligand excluded by PLIP EDO.81: 4 residues within 4Å: Chain G: E.10, D.11, A.14 Ligands: EDO.82 Ligand excluded by PLIP EDO.82: 5 residues within 4Å: Chain G: D.11, A.14, S.15, T.116 Ligands: EDO.81 Ligand excluded by PLIP EDO.83: 5 residues within 4Å: Chain G: Y.162, K.166 Chain J: K.150, E.167 Ligands: EDO.115 Ligand excluded by PLIP EDO.84: 3 residues within 4Å: Chain G: Y.25, V.29, L.102 Ligand excluded by PLIP EDO.87: 7 residues within 4Å: Chain H: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligand excluded by PLIP EDO.88: 3 residues within 4Å: Chain H: K.142, D.146 Chain L: E.38 Ligand excluded by PLIP EDO.89: 5 residues within 4Å: Chain H: F.50, E.53, S.54, E.57, K.143 Ligand excluded by PLIP EDO.90: 6 residues within 4Å: Chain H: L.111, H.114, S.115, S.118 Chain J: N.121, P.123 Ligand excluded by PLIP EDO.91: 4 residues within 4Å: Chain H: Y.162 Chain P: K.150, F.164, E.167 Ligand excluded by PLIP EDO.92: 4 residues within 4Å: Chain H: A.14, N.17, V.77, Q.79 Ligand excluded by PLIP EDO.93: 9 residues within 4Å: Chain H: Y.36, D.41, V.42, L.44, G.90, T.91, G.92, E.161 Chain P: R.153 Ligand excluded by PLIP EDO.97: 8 residues within 4Å: Chain I: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.100 Ligand excluded by PLIP EDO.98: 5 residues within 4Å: Chain I: K.150, F.164, E.167, L.168 Chain J: Y.162 Ligand excluded by PLIP EDO.99: 5 residues within 4Å: Chain I: Y.162 Chain X: K.150, F.164, E.167, L.168 Ligand excluded by PLIP EDO.100: 7 residues within 4Å: Chain I: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.97, EDO.103 Ligand excluded by PLIP EDO.101: 7 residues within 4Å: Chain I: Y.36, L.44, G.90, T.91, G.92, E.161 Chain X: R.153 Ligand excluded by PLIP EDO.102: 4 residues within 4Å: Chain I: N.17, K.18, V.77, Q.79 Ligand excluded by PLIP EDO.103: 6 residues within 4Å: Chain I: K.49, F.50, E.53, L.168, N.169 Ligands: EDO.100 Ligand excluded by PLIP EDO.108: 8 residues within 4Å: Chain J: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.109 Ligand excluded by PLIP EDO.109: 5 residues within 4Å: Chain J: F.50, E.53, S.54, K.143 Ligands: EDO.108 Ligand excluded by PLIP EDO.110: 3 residues within 4Å: Chain G: E.38 Chain J: K.142, D.146 Ligand excluded by PLIP EDO.111: 7 residues within 4Å: Chain J: A.154, G.155, T.157, G.158, L.159, G.160 Ligands: EDO.114 Ligand excluded by PLIP EDO.112: 3 residues within 4Å: Chain I: K.142, D.146 Chain J: E.38 Ligand excluded by PLIP EDO.113: 8 residues within 4Å: Chain I: R.153 Chain J: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.114: 6 residues within 4Å: Chain G: T.157, G.158, L.159 Chain J: R.153, A.154 Ligands: EDO.111 Ligand excluded by PLIP EDO.115: 6 residues within 4Å: Chain G: Y.162 Chain J: M.147, K.150, F.164, E.167 Ligands: EDO.83 Ligand excluded by PLIP EDO.116: 4 residues within 4Å: Chain J: N.7, Y.8, H.9, N.120 Ligand excluded by PLIP EDO.117: 3 residues within 4Å: Chain H: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.121: 8 residues within 4Å: Chain K: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.123 Ligand excluded by PLIP EDO.122: 3 residues within 4Å: Chain K: K.142, D.146 Chain T: E.38 Ligand excluded by PLIP EDO.123: 5 residues within 4Å: Chain K: F.50, E.53, S.54, K.143 Ligands: EDO.121 Ligand excluded by PLIP EDO.124: 6 residues within 4Å: Chain K: L.111, H.114, S.115, S.118 Chain S: N.121, P.123 Ligand excluded by PLIP EDO.125: 2 residues within 4Å: Chain K: Y.25, A.82 Ligand excluded by PLIP EDO.126: 8 residues within 4Å: Chain B: R.153 Chain K: D.41, V.42, L.44, W.89, G.90, T.91, E.161 Ligand excluded by PLIP EDO.127: 4 residues within 4Å: Chain K: K.150, F.164, E.167 Chain T: Y.162 Ligand excluded by PLIP EDO.128: 5 residues within 4Å: Chain I: R.39, D.41 Chain K: A.1, S.2, R.75 Ligand excluded by PLIP EDO.129: 4 residues within 4Å: Chain K: E.10, D.11, A.14 Ligands: EDO.130 Ligand excluded by PLIP EDO.130: 5 residues within 4Å: Chain K: D.11, A.14, S.15, T.116 Ligands: EDO.129 Ligand excluded by PLIP EDO.131: 5 residues within 4Å: Chain B: K.150, E.167 Chain K: Y.162, K.166 Ligands: EDO.19 Ligand excluded by PLIP EDO.132: 3 residues within 4Å: Chain K: Y.25, V.29, L.102 Ligand excluded by PLIP EDO.135: 7 residues within 4Å: Chain L: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligand excluded by PLIP EDO.136: 3 residues within 4Å: Chain D: E.38 Chain L: K.142, D.146 Ligand excluded by PLIP EDO.137: 5 residues within 4Å: Chain L: F.50, E.53, S.54, E.57, K.143 Ligand excluded by PLIP EDO.138: 6 residues within 4Å: Chain B: N.121, P.123 Chain L: L.111, H.114, S.115, S.118 Ligand excluded by PLIP EDO.139: 4 residues within 4Å: Chain H: K.150, F.164, E.167 Chain L: Y.162 Ligand excluded by PLIP EDO.140: 4 residues within 4Å: Chain L: A.14, N.17, V.77, Q.79 Ligand excluded by PLIP EDO.141: 9 residues within 4Å: Chain H: R.153 Chain L: Y.36, D.41, V.42, L.44, G.90, T.91, G.92, E.161 Ligand excluded by PLIP EDO.145: 8 residues within 4Å: Chain M: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.148 Ligand excluded by PLIP EDO.146: 5 residues within 4Å: Chain M: K.150, F.164, E.167, L.168 Chain N: Y.162 Ligand excluded by PLIP EDO.147: 5 residues within 4Å: Chain M: Y.162 Chain V: K.150, F.164, E.167, L.168 Ligand excluded by PLIP EDO.148: 7 residues within 4Å: Chain M: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.145, EDO.151 Ligand excluded by PLIP EDO.149: 7 residues within 4Å: Chain M: Y.36, L.44, G.90, T.91, G.92, E.161 Chain V: R.153 Ligand excluded by PLIP EDO.150: 4 residues within 4Å: Chain M: N.17, K.18, V.77, Q.79 Ligand excluded by PLIP EDO.151: 6 residues within 4Å: Chain M: K.49, F.50, E.53, L.168, N.169 Ligands: EDO.148 Ligand excluded by PLIP EDO.156: 8 residues within 4Å: Chain N: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.157 Ligand excluded by PLIP EDO.157: 5 residues within 4Å: Chain N: F.50, E.53, S.54, K.143 Ligands: EDO.156 Ligand excluded by PLIP EDO.158: 3 residues within 4Å: Chain C: E.38 Chain N: K.142, D.146 Ligand excluded by PLIP EDO.159: 7 residues within 4Å: Chain N: A.154, G.155, T.157, G.158, L.159, G.160 Ligands: EDO.162 Ligand excluded by PLIP EDO.160: 3 residues within 4Å: Chain M: K.142, D.146 Chain N: E.38 Ligand excluded by PLIP EDO.161: 8 residues within 4Å: Chain M: R.153 Chain N: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.162: 6 residues within 4Å: Chain C: T.157, G.158, L.159 Chain N: R.153, A.154 Ligands: EDO.159 Ligand excluded by PLIP EDO.163: 6 residues within 4Å: Chain C: Y.162 Chain N: M.147, K.150, F.164, E.167 Ligands: EDO.35 Ligand excluded by PLIP EDO.164: 4 residues within 4Å: Chain N: N.7, Y.8, H.9, N.120 Ligand excluded by PLIP EDO.165: 3 residues within 4Å: Chain D: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.169: 8 residues within 4Å: Chain O: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.171 Ligand excluded by PLIP EDO.170: 3 residues within 4Å: Chain O: K.142, D.146 Chain R: E.38 Ligand excluded by PLIP EDO.171: 5 residues within 4Å: Chain O: F.50, E.53, S.54, K.143 Ligands: EDO.169 Ligand excluded by PLIP EDO.172: 6 residues within 4Å: Chain O: L.111, H.114, S.115, S.118 Chain Q: N.121, P.123 Ligand excluded by PLIP EDO.173: 2 residues within 4Å: Chain O: Y.25, A.82 Ligand excluded by PLIP EDO.174: 8 residues within 4Å: Chain F: R.153 Chain O: D.41, V.42, L.44, W.89, G.90, T.91, E.161 Ligand excluded by PLIP EDO.175: 4 residues within 4Å: Chain O: K.150, F.164, E.167 Chain R: Y.162 Ligand excluded by PLIP EDO.176: 5 residues within 4Å: Chain M: R.39, D.41 Chain O: A.1, S.2, R.75 Ligand excluded by PLIP EDO.177: 4 residues within 4Å: Chain O: E.10, D.11, A.14 Ligands: EDO.178 Ligand excluded by PLIP EDO.178: 5 residues within 4Å: Chain O: D.11, A.14, S.15, T.116 Ligands: EDO.177 Ligand excluded by PLIP EDO.179: 5 residues within 4Å: Chain F: K.150, E.167 Chain O: Y.162, K.166 Ligands: EDO.67 Ligand excluded by PLIP EDO.180: 3 residues within 4Å: Chain O: Y.25, V.29, L.102 Ligand excluded by PLIP EDO.183: 7 residues within 4Å: Chain P: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligand excluded by PLIP EDO.184: 3 residues within 4Å: Chain H: E.38 Chain P: K.142, D.146 Ligand excluded by PLIP EDO.185: 5 residues within 4Å: Chain P: F.50, E.53, S.54, E.57, K.143 Ligand excluded by PLIP EDO.186: 6 residues within 4Å: Chain F: N.121, P.123 Chain P: L.111, H.114, S.115, S.118 Ligand excluded by PLIP EDO.187: 4 residues within 4Å: Chain D: K.150, F.164, E.167 Chain P: Y.162 Ligand excluded by PLIP EDO.188: 4 residues within 4Å: Chain P: A.14, N.17, V.77, Q.79 Ligand excluded by PLIP EDO.189: 9 residues within 4Å: Chain D: R.153 Chain P: Y.36, D.41, V.42, L.44, G.90, T.91, G.92, E.161 Ligand excluded by PLIP EDO.193: 8 residues within 4Å: Chain Q: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.195 Ligand excluded by PLIP EDO.194: 3 residues within 4Å: Chain Q: E.38 Chain W: K.142, D.146 Ligand excluded by PLIP EDO.195: 5 residues within 4Å: Chain Q: F.50, E.53, S.54, K.143 Ligands: EDO.193 Ligand excluded by PLIP EDO.196: 2 residues within 4Å: Chain Q: Q.80 Chain R: Q.80 Ligand excluded by PLIP EDO.197: 4 residues within 4Å: Chain Q: Y.162 Chain W: K.150, F.164, E.167 Ligand excluded by PLIP EDO.198: 7 residues within 4Å: Chain Q: Y.36, V.42, L.44, G.90, T.91, E.161 Chain W: R.153 Ligand excluded by PLIP EDO.199: 5 residues within 4Å: Chain Q: Q.63, K.67 Chain R: Y.35, E.38, K.52 Ligand excluded by PLIP EDO.200: 5 residues within 4Å: Chain Q: K.49, F.50, E.53, L.168, N.169 Ligand excluded by PLIP EDO.201: 3 residues within 4Å: Chain Q: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.205: 5 residues within 4Å: Chain R: N.21, Y.25, Q.80, I.81, A.82 Ligand excluded by PLIP EDO.206: 8 residues within 4Å: Chain R: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.208 Ligand excluded by PLIP EDO.207: 3 residues within 4Å: Chain E: E.38 Chain R: K.142, D.146 Ligand excluded by PLIP EDO.208: 6 residues within 4Å: Chain R: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.206 Ligand excluded by PLIP EDO.209: 8 residues within 4Å: Chain O: R.153 Chain R: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.214: 8 residues within 4Å: Chain S: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.216 Ligand excluded by PLIP EDO.215: 3 residues within 4Å: Chain S: E.38 Chain U: K.142, D.146 Ligand excluded by PLIP EDO.216: 5 residues within 4Å: Chain S: F.50, E.53, S.54, K.143 Ligands: EDO.214 Ligand excluded by PLIP EDO.217: 2 residues within 4Å: Chain S: Q.80 Chain T: Q.80 Ligand excluded by PLIP EDO.218: 4 residues within 4Å: Chain S: Y.162 Chain U: K.150, F.164, E.167 Ligand excluded by PLIP EDO.219: 7 residues within 4Å: Chain S: Y.36, V.42, L.44, G.90, T.91, E.161 Chain U: R.153 Ligand excluded by PLIP EDO.220: 5 residues within 4Å: Chain S: Q.63, K.67 Chain T: Y.35, E.38, K.52 Ligand excluded by PLIP EDO.221: 5 residues within 4Å: Chain S: K.49, F.50, E.53, L.168, N.169 Ligand excluded by PLIP EDO.222: 3 residues within 4Å: Chain S: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.226: 5 residues within 4Å: Chain T: N.21, Y.25, Q.80, I.81, A.82 Ligand excluded by PLIP EDO.227: 8 residues within 4Å: Chain T: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.229 Ligand excluded by PLIP EDO.228: 3 residues within 4Å: Chain A: E.38 Chain T: K.142, D.146 Ligand excluded by PLIP EDO.229: 6 residues within 4Å: Chain T: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.227 Ligand excluded by PLIP EDO.230: 8 residues within 4Å: Chain K: R.153 Chain T: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.235: 8 residues within 4Å: Chain U: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.237 Ligand excluded by PLIP EDO.236: 3 residues within 4Å: Chain Q: K.142, D.146 Chain U: E.38 Ligand excluded by PLIP EDO.237: 5 residues within 4Å: Chain U: F.50, E.53, S.54, K.143 Ligands: EDO.235 Ligand excluded by PLIP EDO.238: 2 residues within 4Å: Chain U: Q.80 Chain V: Q.80 Ligand excluded by PLIP EDO.239: 4 residues within 4Å: Chain Q: K.150, F.164, E.167 Chain U: Y.162 Ligand excluded by PLIP EDO.240: 7 residues within 4Å: Chain Q: R.153 Chain U: Y.36, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.241: 5 residues within 4Å: Chain U: Q.63, K.67 Chain V: Y.35, E.38, K.52 Ligand excluded by PLIP EDO.242: 5 residues within 4Å: Chain U: K.49, F.50, E.53, L.168, N.169 Ligand excluded by PLIP EDO.243: 3 residues within 4Å: Chain U: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.247: 5 residues within 4Å: Chain V: N.21, Y.25, Q.80, I.81, A.82 Ligand excluded by PLIP EDO.248: 8 residues within 4Å: Chain V: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.250 Ligand excluded by PLIP EDO.249: 3 residues within 4Å: Chain M: E.38 Chain V: K.142, D.146 Ligand excluded by PLIP EDO.250: 6 residues within 4Å: Chain V: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.248 Ligand excluded by PLIP EDO.251: 8 residues within 4Å: Chain C: R.153 Chain V: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.256: 8 residues within 4Å: Chain W: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.258 Ligand excluded by PLIP EDO.257: 3 residues within 4Å: Chain S: K.142, D.146 Chain W: E.38 Ligand excluded by PLIP EDO.258: 5 residues within 4Å: Chain W: F.50, E.53, S.54, K.143 Ligands: EDO.256 Ligand excluded by PLIP EDO.259: 2 residues within 4Å: Chain W: Q.80 Chain X: Q.80 Ligand excluded by PLIP EDO.260: 4 residues within 4Å: Chain S: K.150, F.164, E.167 Chain W: Y.162 Ligand excluded by PLIP EDO.261: 7 residues within 4Å: Chain S: R.153 Chain W: Y.36, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP EDO.262: 5 residues within 4Å: Chain W: Q.63, K.67 Chain X: Y.35, E.38, K.52 Ligand excluded by PLIP EDO.263: 5 residues within 4Å: Chain W: K.49, F.50, E.53, L.168, N.169 Ligand excluded by PLIP EDO.264: 3 residues within 4Å: Chain W: Q.97, L.100, D.101 Ligand excluded by PLIP EDO.268: 5 residues within 4Å: Chain X: N.21, Y.25, Q.80, I.81, A.82 Ligand excluded by PLIP EDO.269: 8 residues within 4Å: Chain X: Y.30, F.50, S.54, E.58, E.103, S.140, I.144 Ligands: EDO.271 Ligand excluded by PLIP EDO.270: 3 residues within 4Å: Chain I: E.38 Chain X: K.142, D.146 Ligand excluded by PLIP EDO.271: 6 residues within 4Å: Chain X: F.50, E.53, S.54, E.57, K.143 Ligands: EDO.269 Ligand excluded by PLIP EDO.272: 8 residues within 4Å: Chain G: R.153 Chain X: Y.36, D.41, V.42, L.44, G.90, T.91, E.161 Ligand excluded by PLIP

52 x SO4: SULFATE ION(Non-functional Binders)

SO4.8: 3 residues within 4Å: Chain A: R.5, Q.6, N.7 Ligand excluded by PLIP SO4.9: 3 residues within 4Å: Chain A: M.86, R.87, E.88 Ligand excluded by PLIP SO4.10: 5 residues within 4Å: Chain A: S.27, Y.28, S.55 Chain C: L.24 Ligands: SO4.37 Ligand excluded by PLIP SO4.22: 7 residues within 4Å: Chain B: S.27, Y.28, L.31, S.55 Chain D: R.59, I.81 Ligands: SO4.46 Ligand excluded by PLIP SO4.37: 8 residues within 4Å: Chain A: L.24 Chain C: L.24, S.27, Y.28, L.31, S.55, R.59 Ligands: SO4.10 Ligand excluded by PLIP SO4.38: 2 residues within 4Å: Chain C: Q.6, N.7 Ligand excluded by PLIP SO4.46: 7 residues within 4Å: Chain B: L.24 Chain D: L.24, S.27, Y.28, S.55, R.59 Ligands: SO4.22 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain D: M.86, R.87, E.88 Ligand excluded by PLIP SO4.56: 3 residues within 4Å: Chain E: R.5, Q.6, N.7 Ligand excluded by PLIP SO4.57: 3 residues within 4Å: Chain E: M.86, R.87, E.88 Ligand excluded by PLIP SO4.58: 5 residues within 4Å: Chain E: S.27, Y.28, S.55 Chain G: L.24 Ligands: SO4.85 Ligand excluded by PLIP SO4.70: 7 residues within 4Å: Chain F: S.27, Y.28, L.31, S.55 Chain H: R.59, I.81 Ligands: SO4.94 Ligand excluded by PLIP SO4.85: 8 residues within 4Å: Chain E: L.24 Chain G: L.24, S.27, Y.28, L.31, S.55, R.59 Ligands: SO4.58 Ligand excluded by PLIP SO4.86: 2 residues within 4Å: Chain G: Q.6, N.7 Ligand excluded by PLIP SO4.94: 7 residues within 4Å: Chain F: L.24 Chain H: L.24, S.27, Y.28, S.55, R.59 Ligands: SO4.70 Ligand excluded by PLIP SO4.95: 3 residues within 4Å: Chain H: M.86, R.87, E.88 Ligand excluded by PLIP SO4.104: 3 residues within 4Å: Chain I: R.5, Q.6, N.7 Ligand excluded by PLIP SO4.105: 3 residues within 4Å: Chain I: M.86, R.87, E.88 Ligand excluded by PLIP SO4.106: 5 residues within 4Å: Chain I: S.27, Y.28, S.55 Chain K: L.24 Ligands: SO4.133 Ligand excluded by PLIP SO4.118: 7 residues within 4Å: Chain J: S.27, Y.28, L.31, S.55 Chain L: R.59, I.81 Ligands: SO4.142 Ligand excluded by PLIP SO4.133: 8 residues within 4Å: Chain I: L.24 Chain K: L.24, S.27, Y.28, L.31, S.55, R.59 Ligands: SO4.106 Ligand excluded by PLIP SO4.134: 2 residues within 4Å: Chain K: Q.6, N.7 Ligand excluded by PLIP SO4.142: 7 residues within 4Å: Chain J: L.24 Chain L: L.24, S.27, Y.28, S.55, R.59 Ligands: SO4.118 Ligand excluded by PLIP SO4.143: 3 residues within 4Å: Chain L: M.86, R.87, E.88 Ligand excluded by PLIP SO4.152: 3 residues within 4Å: Chain M: R.5, Q.6, N.7 Ligand excluded by PLIP SO4.153: 3 residues within 4Å: Chain M: M.86, R.87, E.88 Ligand excluded by PLIP SO4.154: 5 residues within 4Å: Chain M: S.27, Y.28, S.55 Chain O: L.24 Ligands: SO4.181 Ligand excluded by PLIP SO4.166: 7 residues within 4Å: Chain N: S.27, Y.28, L.31, S.55 Chain P: R.59, I.81 Ligands: SO4.190 Ligand excluded by PLIP SO4.181: 8 residues within 4Å: Chain M: L.24 Chain O: L.24, S.27, Y.28, L.31, S.55, R.59 Ligands: SO4.154 Ligand excluded by PLIP SO4.182: 2 residues within 4Å: Chain O: Q.6, N.7 Ligand excluded by PLIP SO4.190: 7 residues within 4Å: Chain N: L.24 Chain P: L.24, S.27, Y.28, S.55, R.59 Ligands: SO4.166 Ligand excluded by PLIP SO4.191: 3 residues within 4Å: Chain P: M.86, R.87, E.88 Ligand excluded by PLIP SO4.202: 3 residues within 4Å: Chain Q: S.85, M.86, R.87 Ligand excluded by PLIP SO4.203: 7 residues within 4Å: Chain Q: L.24, S.27, Y.28, S.55 Chain R: R.59, I.81 Ligands: SO4.211 Ligand excluded by PLIP SO4.204: 2 residues within 4Å: Chain Q: Q.6, N.7 Ligand excluded by PLIP SO4.210: 3 residues within 4Å: Chain R: M.86, R.87, E.88 Ligand excluded by PLIP SO4.211: 8 residues within 4Å: Chain Q: L.24, R.59 Chain R: L.24, S.27, Y.28, L.31, I.81 Ligands: SO4.203 Ligand excluded by PLIP SO4.223: 3 residues within 4Å: Chain S: S.85, M.86, R.87 Ligand excluded by PLIP SO4.224: 7 residues within 4Å: Chain S: L.24, S.27, Y.28, S.55 Chain T: R.59, I.81 Ligands: SO4.232 Ligand excluded by PLIP SO4.225: 2 residues within 4Å: Chain S: Q.6, N.7 Ligand excluded by PLIP SO4.231: 3 residues within 4Å: Chain T: M.86, R.87, E.88 Ligand excluded by PLIP SO4.232: 8 residues within 4Å: Chain S: L.24, R.59 Chain T: L.24, S.27, Y.28, L.31, I.81 Ligands: SO4.224 Ligand excluded by PLIP SO4.244: 3 residues within 4Å: Chain U: S.85, M.86, R.87 Ligand excluded by PLIP SO4.245: 7 residues within 4Å: Chain U: L.24, S.27, Y.28, S.55 Chain V: R.59, I.81 Ligands: SO4.253 Ligand excluded by PLIP SO4.246: 2 residues within 4Å: Chain U: Q.6, N.7 Ligand excluded by PLIP SO4.252: 3 residues within 4Å: Chain V: M.86, R.87, E.88 Ligand excluded by PLIP SO4.253: 8 residues within 4Å: Chain U: L.24, R.59 Chain V: L.24, S.27, Y.28, L.31, I.81 Ligands: SO4.245 Ligand excluded by PLIP SO4.265: 3 residues within 4Å: Chain W: S.85, M.86, R.87 Ligand excluded by PLIP SO4.266: 7 residues within 4Å: Chain W: L.24, S.27, Y.28, S.55 Chain X: R.59, I.81 Ligands: SO4.274 Ligand excluded by PLIP SO4.267: 2 residues within 4Å: Chain W: Q.6, N.7 Ligand excluded by PLIP SO4.273: 3 residues within 4Å: Chain X: M.86, R.87, E.88 Ligand excluded by PLIP SO4.274: 8 residues within 4Å: Chain W: L.24, R.59 Chain X: L.24, S.27, Y.28, L.31, I.81 Ligands: SO4.266 Ligand excluded by PLIP

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.11: 3 residues within 4Å: Chain A: A.82, A.83 Chain C: Q.80 Ligand excluded by PLIP CL.59: 3 residues within 4Å: Chain E: A.82, A.83 Chain G: Q.80 Ligand excluded by PLIP CL.107: 3 residues within 4Å: Chain I: A.82, A.83 Chain K: Q.80 Ligand excluded by PLIP CL.155: 3 residues within 4Å: Chain M: A.82, A.83 Chain O: Q.80 Ligand excluded by PLIP

20 x MG: MAGNESIUM ION(Non-covalent)

MG.23: 3 residues within 4Å: Chain B: G.155, P.156, T.157 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:T.157 MG.24: 1 residues within 4Å: Chain B: N.7 No protein-ligand interaction detected (PLIP) MG.48: 2 residues within 4Å: Chain D: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.71: 3 residues within 4Å: Chain F: G.155, P.156, T.157 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:T.157 MG.72: 1 residues within 4Å: Chain F: N.7 No protein-ligand interaction detected (PLIP) MG.96: 2 residues within 4Å: Chain H: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.119: 3 residues within 4Å: Chain J: G.155, P.156, T.157 1 PLIP interactions: 1 interactions with chain J Metal complexes: J:T.157 MG.120: 1 residues within 4Å: Chain J: N.7 No protein-ligand interaction detected (PLIP) MG.144: 2 residues within 4Å: Chain L: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.167: 3 residues within 4Å: Chain N: G.155, P.156, T.157 1 PLIP interactions: 1 interactions with chain N Metal complexes: N:T.157 MG.168: 1 residues within 4Å: Chain N: N.7 No protein-ligand interaction detected (PLIP) MG.192: 2 residues within 4Å: Chain P: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.212: 4 residues within 4Å: Chain R: A.1, S.2, R.5, G.73 2 PLIP interactions: 1 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:G.73, H2O.112 MG.213: 2 residues within 4Å: Chain R: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.233: 4 residues within 4Å: Chain T: A.1, S.2, R.5, G.73 2 PLIP interactions: 1 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:G.73, H2O.126 MG.234: 2 residues within 4Å: Chain T: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.254: 4 residues within 4Å: Chain V: A.1, S.2, R.5, G.73 2 PLIP interactions: 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:G.73, H2O.140 MG.255: 2 residues within 4Å: Chain V: Q.6, N.7 No protein-ligand interaction detected (PLIP) MG.275: 4 residues within 4Å: Chain X: A.1, S.2, R.5, G.73 2 PLIP interactions: 1 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:G.73, H2O.153 MG.276: 2 residues within 4Å: Chain X: Q.6, N.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Masuda, T. et al., The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin. Protein Sci. (2018)

Release Date

2018-08-22

Peptides

Ferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
E

D
F

E
B

F
C

G
E

H
F

I
B

J
C

K
E

L
F

M
B

N
C

O
E

P
F

Q
A

R
D

S
A

T
D

U
A

V
D

W
A

X
D

Ferritin

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