SMTL ID : 6a7t.1

Ca2+-independent C-type lectin SPL-1 from Saxidomus purpuratus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: T.64, E.66, E.70, E.153 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.64, A:E.70, A:E.153, A:E.153, H2O.6 CA.2: 4 residues within 4Å: Chain B: T.65, E.67, E.71, E.154 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:T.65, B:E.67, B:E.71, B:E.154, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Unno, H. et al., Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus. Protein Sci. (2019)

Release Date

2019-03-20

Peptides

N-acetylglucosamine-specific lectin: A
N-acetylglucosamine-specific lectin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

N-acetylglucosamine-specific lectin

N-acetylglucosamine-specific lectin

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