SMTL ID : 6ax9.1

F95N Epi-isozizaene synthase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.120, Y.193, E.196 Ligands: MG.2, POP.4 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.120, H2O.1, H2O.1, H2O.1, H2O.1 MG.2: 4 residues within 4Å: Chain A: D.120, R.359 Ligands: MG.1, POP.4 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.120, H2O.1, H2O.1, H2O.1 MG.3: 5 residues within 4Å: Chain A: R.215, N.261, S.265, E.269 Ligands: POP.4 4 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:S.265, A:E.269, H2O.1, POP.4

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.4: 12 residues within 4Å: Chain A: D.120, R.215, N.261, S.265, K.268, E.269, R.359, Y.360 Ligands: MG.1, MG.2, MG.3, BTM.5 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.265, A:Y.360 Water bridges: A:R.215, A:K.268, A:E.274 Salt bridges: A:R.215, A:K.268, A:K.268, A:R.359

1 x BTM: N-benzyl-N,N-diethylethanaminium(Non-covalent)

BTM.5: 13 residues within 4Å: Chain A: L.93, N.116, F.117, Y.193, T.218, F.219, N.261, W.346, V.350, F.353, H.354, Y.360 Ligands: POP.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.93, A:L.93, A:F.117, A:F.219, A:W.346, A:V.350, A:F.353 pi-Stacking: A:F.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blank, P.N. et al., Substitution of Aromatic Residues with Polar Residues in the Active Site Pocket of epi-Isozizaene Synthase Leads to the Generation of New Cyclic Sesquiterpenes. Biochemistry (2017)

Release Date

2017-10-18

Peptides

Epi-isozizaene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epi-isozizaene synthase