SMTL ID : 6azz.1 (1 other biounit)

Crystal structure of Pfs25 in complex with the transmission blocking antibody 1190

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: V.93, Q.112, G.113 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.115 ACT.3: 5 residues within 4Å: Chain B: Q.36, K.38, P.58, G.80, D.81 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:P.58 Hydrogen bonds: B:Q.36, B:D.81 Salt bridges: B:K.38 ACT.4: 8 residues within 4Å: Chain A: G.42, Q.43, G.44 Chain B: D.84, Y.86, G.102, G.103, T.105 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.86, B:T.105, B:T.105 Water bridges: A:G.44 ACT.5: 6 residues within 4Å: Chain A: D.31, Y.32, R.100 Chain C: D.104, S.106, N.107 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:D.31, C:S.106, C:N.107 Water bridges: A:T.28, A:T.28, A:T.28 Salt bridges: A:R.100

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: Q.39, G.42 Chain B: Q.37, G.40 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.40, A:G.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scally, S.W. et al., Molecular definition of multiple sites of antibody inhibition of malaria transmission-blocking vaccine antigen Pfs25. Nat Commun (2017)

Release Date

2017-11-08

Peptides

1190 antibody, heavy chain: A
1190 antibody, light chain: B
Pfs25: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
E

C
D

1190 antibody, heavy chain

1190 antibody, light chain

Pfs25

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