SMTL ID : 6bib.2 (1 other biounit)

1.95 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x DW7: benzyl [(9S,12S,15S)-12-(cyclohexylmethyl)-9-(hydroxymethyl)-6,11,14-trioxo-1,5,10,13,18,19-hexaazabicyclo[15.2.1]icosa-17(20),18-dien-15-yl]carbamate(Covalent)

DW7.1: 16 residues within 4Å: Chain A: H.37, E.61, I.116, Q.117, R.119, V.121, T.141, I.142, P.143, C.146, H.164, A.165, A.166, A.167, T.168, K.169 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:E.61, A:R.119, A:R.119, A:V.121, A:A.167 Hydrogen bonds: A:Q.117, A:P.143, A:A.165, A:A.167, A:A.167 Water bridges: A:C.146 pi-Stacking: A:H.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Galasiti Kankanamalage, A.C. et al., Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease. Proteins (2019)

Release Date

2018-11-07

Peptides

3C-like protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

3C-like protease

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