SMTL ID : 6brl.1

Crystal structure of a glutamate tRNA ligase from Elizabethkingia meningosepticum CCUG26117 in complex with its amino acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x GLU: GLUTAMIC ACID(Non-covalent)

GLU.1: 9 residues within 4Å: Chain A: R.15, A.17, P.18, S.19, E.51, Y.210, N.214, R.228, W.232 11 PLIP interactions: 10 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:A.17, A:Y.210 Hydrogen bonds: A:S.19, A:S.19, A:E.51, A:N.214, E.1 Water bridges: A:R.15, A:E.231 Salt bridges: A:R.15, A:R.228

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 10 residues within 4Å: Chain A: R.30, L.256, S.257, L.314, G.315, V.339, H.340, A.342, G.343, A.344 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.257, A:A.342, A:A.344 Water bridges: A:R.30 EDO.3: 3 residues within 4Å: Chain A: K.11, N.42, G.43 No protein-ligand interaction detected (PLIP) EDO.4: 3 residues within 4Å: Chain A: G.495, K.496, E.497 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.496, A:E.497 Water bridges: A:G.495, A:E.498

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mayclin, S.J. et al., Crystal structure of a glutamate tRNA ligase from Elizabethkingia meningosepticum CCUG26117 in complex with its amino acid. TO BE PUBLISHED

Release Date

2018-01-17

Peptides

Glutamate tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamate tRNA ligase