SMTL ID : 6bxb.2 (1 other biounit)

Crystal structure of an extended b3 integrin P33

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.119, S.121, S.123, T.188, D.221 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.121, A:S.123, A:D.221, H2O.1, H2O.2

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 6 residues within 4Å: Chain A: S.306, F.307, N.308, S.335, E.337 Ligands: NAG.3 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.337 Hydrogen bonds: A:S.335 NAG.3: 4 residues within 4Å: Chain A: N.99, F.100, S.335 Ligands: NAG.2 No protein-ligand interaction detected (PLIP) NAG.4: 5 residues within 4Å: Chain A: N.386, N.387, G.388, N.389, W.403 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.387, A:N.387

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, D. et al., Structure of an extended beta3integrin. Blood (2018)

Release Date

2018-08-01

Peptides

Chimera protein of Integrin beta-3 and Integrin alpha-L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Chimera protein of Integrin beta-3 and Integrin alpha-L

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