SMTL ID : 6c8w.1

Crystal structure of Aspartate Semialdehyde Dehydrogenase with NADP from Blastomyces dermatitidis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 24 residues within 4Å: Chain A: G.13, A.14, T.15, G.16, A.17, V.18, A.39, S.40, S.43, G.86, L.87, D.88, P.89, A.91, I.95, N.109, A.110, C.154, S.185, G.186, G.188, N.340, T.341, A.345 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.18, A:A.345 Hydrogen bonds: A:G.13, A:T.15, A:T.15, A:G.16, A:A.17, A:V.18, A:G.19, A:S.40, A:S.40, A:S.40, A:S.43, A:S.43, A:L.87, A:D.88, A:N.340, A:N.340 NAP.2: 22 residues within 4Å: Chain B: G.13, T.15, G.16, A.17, V.18, A.39, S.40, S.43, C.72, G.86, L.87, D.88, P.89, A.91, I.95, N.109, A.110, N.153, C.154, G.188, E.208, K.211 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:G.13, B:T.15, B:T.15, B:G.16, B:A.17, B:V.18, B:S.40, B:S.40, B:S.40, B:S.43, B:G.86, B:L.87, B:D.88, B:C.154, B:E.208 NAP.3: 24 residues within 4Å: Chain C: G.13, A.14, T.15, G.16, A.17, V.18, A.39, S.40, S.43, G.86, L.87, D.88, P.89, A.91, I.95, N.109, A.110, C.154, S.185, G.186, G.188, N.340, T.341, A.345 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:V.18, C:A.345 Hydrogen bonds: C:G.13, C:T.15, C:G.16, C:A.17, C:V.18, C:G.19, C:S.40, C:S.40, C:S.40, C:S.43, C:S.43, C:L.87, C:D.88, C:N.340, C:N.340 NAP.4: 22 residues within 4Å: Chain D: G.13, T.15, G.16, A.17, V.18, A.39, S.40, S.43, C.72, G.86, L.87, D.88, P.89, A.91, I.95, N.109, A.110, N.153, C.154, G.188, E.208, K.211 15 PLIP interactions: 15 interactions with chain D Hydrogen bonds: D:G.13, D:T.15, D:T.15, D:G.16, D:A.17, D:V.18, D:S.40, D:S.40, D:S.40, D:S.43, D:G.86, D:L.87, D:D.88, D:C.154, D:E.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dahal, G.P. et al., Structural insights into inhibitor binding to a fungal ortholog of aspartate semialdehyde dehydrogenase. Biochem.Biophys.Res.Commun. (2018)

Release Date

2019-01-30

Peptides

Aspartate-semialdehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Aspartate-semialdehyde dehydrogenase

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