SMTL ID : 6cbs.1 (1 other biounit)

DnaG Primase C-terminal domain complex with SSB C-terminal peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.73 Ligands: ACY.4 3 PLIP interactions: 1 interactions with chain A, 1 Ligand-Ligand interactions, 1 Ligand-Water interactions Metal complexes: A:H.73, ACY.4, H2O.6 ZN.2: 3 residues within 4Å: Chain A: D.104, H.108 Ligands: ACY.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:D.104, A:D.104, A:H.108, ACY.5 ZN.3: 3 residues within 4Å: Chain A: E.43, R.53, E.54 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.43, H2O.1, H2O.4, H2O.6

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 4 residues within 4Å: Chain A: N.57, T.58, H.73 Ligands: ZN.1 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Y.74 Salt bridges: A:H.73 ACY.5: 3 residues within 4Å: Chain A: D.104, H.108 Ligands: ZN.2 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oakley, A.J. et al., DnaG Primase C-terminal domain complex with SSB C-terminal peptide. To be Published

Release Date

2019-02-06

Peptides

DNA primase, single-stranded DNA-binding protein chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA primase, single-stranded DNA-binding protein chimera

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