SMTL ID : 6cz5.1

Crystal structure of small molecule AMP-acrylamide covalently bound to DDX3 S228C

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x FPJ: 5'-O-[(R)-hydroxy(propanoylamino)phosphoryl]adenosine(Covalent)

FPJ.1: 8 residues within 4Å: Chain A: Y.73, R.75, T.77, Q.80, G.100, C.101, G.102, E.158 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.74, A:Q.80, A:Q.80, A:G.102, A:K.161 pi-Stacking: A:Y.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barkovich, K.J. et al., Chemical genetic inhibition of DEAD-box proteins using covalent complementarity. Nucleic Acids Res. (2018)

Release Date

2018-08-08

Peptides

ATP-dependent RNA helicase DDX3X: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATP-dependent RNA helicase DDX3X