SMTL ID : 6d9z.1

Structure of CysZ, a sulfate permease from Pseudomonas Denitrificans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-hexamer

Ligands

20 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 18 residues within 4Å: Chain A: I.41, A.44, I.45, N.46, F.48, S.49, H.50, L.79, V.82 Chain B: G.11, L.14, K.15, M.18, V.213, I.216, V.219 Ligands: BOG.2, BOG.4 Ligand excluded by PLIP BOG.2: 18 residues within 4Å: Chain A: N.33, F.37, L.40, I.41, A.44, V.82, F.83, F.86, T.87, P.217, L.218, N.220, L.221 Chain B: P.217, L.218, V.219 Ligands: BOG.1, BOG.10 Ligand excluded by PLIP BOG.3: 9 residues within 4Å: Chain A: D.53, Q.67, F.68, I.69, W.71, P.72 Chain E: I.150, L.153 Ligands: BOG.4 Ligand excluded by PLIP BOG.4: 11 residues within 4Å: Chain A: F.48, S.49, W.71, V.75, L.79 Chain B: Q.8, I.209, V.213, I.216 Ligands: BOG.1, BOG.3 Ligand excluded by PLIP BOG.5: 10 residues within 4Å: Chain A: W.51, W.54, L.55, V.78, I.81, V.82 Chain E: L.59, P.60, L.63, L.66 Ligand excluded by PLIP BOG.6: 13 residues within 4Å: Chain A: I.41, G.42, F.43, N.46 Chain B: L.14, M.17, M.18, P.20, R.23, V.26, V.222, P.225 Ligands: BOG.7 Ligand excluded by PLIP BOG.7: 10 residues within 4Å: Chain A: I.38, G.39, I.41 Chain B: P.20, R.23, L.24, V.26, L.27, V.222 Ligands: BOG.6 Ligand excluded by PLIP BOG.8: 12 residues within 4Å: Chain B: F.84, T.87, L.88, N.91, E.134, L.138, F.141, L.142, I.146, M.172, Q.176 Chain C: F.65 Ligand excluded by PLIP BOG.9: 11 residues within 4Å: Chain B: G.21, R.23, L.24, F.25, L.27, L.28, S.31, F.115, P.116, A.117, F.118 Ligand excluded by PLIP BOG.10: 16 residues within 4Å: Chain A: I.216, P.217, L.218, V.219 Chain B: F.37, I.41, L.79, V.82, F.83, F.86, L.215, P.217, L.218, N.220 Ligands: BOG.2, BOG.11 Ligand excluded by PLIP BOG.11: 19 residues within 4Å: Chain A: L.30, N.33, L.34, L.218, L.221 Chain B: L.30, N.33, L.34, F.37, F.83, F.86, T.87, A.90, N.91, A.94, L.218, L.221, M.224 Ligands: BOG.10 Ligand excluded by PLIP BOG.12: 15 residues within 4Å: Chain B: F.65, I.69 Chain C: F.83, F.84, T.87, F.141, L.142, A.145, I.146, F.149, W.165, G.169, M.173, Y.211 Ligands: BOG.13 Ligand excluded by PLIP BOG.13: 15 residues within 4Å: Chain B: W.62, F.65 Chain C: F.84, T.85, T.87, L.88, N.91, L.92, E.134, L.138, F.141, L.142, M.172, Q.176 Ligands: BOG.12 Ligand excluded by PLIP BOG.14: 14 residues within 4Å: Chain C: P.217, L.218, V.219 Chain D: N.33, F.37, L.40, I.41, A.44, V.82, F.83, F.86, P.217, N.220, L.221 Ligand excluded by PLIP BOG.15: 11 residues within 4Å: Chain D: F.83, F.84, T.87, L.88, N.91, L.138, F.141, L.142, W.165, M.172, Q.176 Ligand excluded by PLIP BOG.16: 14 residues within 4Å: Chain D: G.21, L.22, R.23, L.24, F.25, L.27, L.28, S.31, F.97, F.115, P.116, A.117, F.118, W.120 Ligand excluded by PLIP BOG.17: 15 residues within 4Å: Chain E: I.41, A.44, I.45, N.46, Q.47, F.48, S.49, L.79, V.82 Chain F: L.14, K.15, M.18, I.216, V.219 Ligands: BOG.18 Ligand excluded by PLIP BOG.18: 11 residues within 4Å: Chain E: S.49, W.71 Chain F: L.10, G.11, L.14, I.209, V.213, V.222, A.223, A.226 Ligands: BOG.17 Ligand excluded by PLIP BOG.19: 16 residues within 4Å: Chain E: G.11, L.14, K.15, M.18, V.213, I.216, V.219, V.222, A.223 Chain F: A.44, I.45, N.46, Q.47, F.48, S.49, H.50 Ligand excluded by PLIP BOG.20: 14 residues within 4Å: Chain F: F.83, T.87, L.88, N.91, E.134, K.137, L.138, F.141, L.142, M.172, M.173, Q.176, P.217, N.220 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Assur Sanghai, Z. et al., Structure-based analysis of CysZ-mediated cellular uptake of sulfate. Elife (2018)

Release Date

2018-05-23

Peptides

Sulfate transporter CysZ: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
A

C
B

D
C

E
D

F
E

Sulfate transporter CysZ