SMTL ID : 6dj6.1 (1 other biounit)

The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with cis-oleic acid to 1.9 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: A.138, S.139, A.143, V.145 Ligands: NA.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.143, A:V.145 Water bridges: A:S.139, A:D.144 GOL.2: 5 residues within 4Å: Chain A: N.186, H.187, E.189, R.256, Y.311 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.189, A:R.256, A:R.256 Water bridges: A:N.186 GOL.3: 5 residues within 4Å: Chain A: S.195, T.196, N.218, E.302, N.303 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.218, A:E.302 GOL.4: 4 residues within 4Å: Chain A: L.197, I.206, L.212, S.214 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.212, A:S.214

1 x OLA: OLEIC ACID(Non-covalent)

OLA.5: 17 residues within 4Å: Chain A: L.63, T.96, S.97, Q.98, L.127, S.128, T.153, D.154, I.192, R.205, T.292, I.295, I.296, H.299, A.304, W.305, A.306 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.63, A:L.127, A:T.153, A:D.154, A:I.192, A:T.292, A:I.296, A:H.299, A:A.304, A:A.306 Hydrogen bonds: A:T.96, A:T.96 Water bridges: A:K.95, A:R.205, A:R.205 Salt bridges: A:R.205

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 5 residues within 4Å: Chain A: A.138, S.141, T.142, A.143 Ligands: GOL.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuypers, M.G. et al., The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein (SPR1019) loaded with cis-oleic acid to 1.9 Angstrom resolution. To Be Published

Release Date

2019-05-29

Peptides

Fatty Acid Kinase (Fak) B2 protein (SPR1019): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty Acid Kinase (Fak) B2 protein (SPR1019)

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