SMTL ID : 6dkv.1

Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 21 round 5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: E.162, P.193, L.194, T.195, T.196 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.162 Water bridges: A:T.195 PEG.2: 4 residues within 4Å: Chain A: W.51, G.83, N.104, T.105 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.83, A:I.84, A:N.104, A:T.105 Water bridges: A:I.84, A:E.102, A:A.106

1 x 6VP: 5-nitro-2-oxidanyl-benzenecarbonitrile(Non-covalent)

6VP.3: 8 residues within 4Å: Chain A: I.12, W.51, E.102, N.104, Y.129, H.202, R.203, K.223 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.12, A:Y.129 Water bridges: A:K.223 pi-Stacking: A:W.51, A:W.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, N.S. et al., The evolution of multiple active site configurations in a designed enzyme. Nat Commun (2018)

Release Date

2018-08-01

Peptides

Kemp eliminase KE07: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kemp eliminase KE07

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