SMTL ID : 6dlj.1

Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 2-Nitro-phenyldiketoacid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.274, R.339, E.434, D.462 Ligands: GXM.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.434, A:D.462, H2O.1, H2O.3 MG.2: 2 residues within 4Å: Chain A: N.234, H.235 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.235, H2O.1, H2O.2, H2O.4

1 x GXM: (2Z)-2-hydroxy-4-(2-nitrophenyl)-4-oxobut-2-enoic acid(Non-covalent)

GXM.3: 16 residues within 4Å: Chain A: V.118, R.339, M.432, E.434, G.459, F.460, L.461, D.462, M.515, T.517, W.541, M.631, D.633, A.635, T.636 Ligands: MG.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.461, A:T.517, A:D.633, A:T.636 Hydrogen bonds: A:R.339, A:R.339, A:E.434, A:L.461, A:D.462

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ellenbarger, J.F. et al., Anion-pi Interactions in Computer-Aided Drug Design: Modeling the Inhibition of Malate Synthase by Phenyl-Diketo Acids. J Chem Inf Model (2018)

Release Date

2018-09-05

Peptides

Malate synthase G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Malate synthase G

Related Entries With Identical Sequence