SMTL ID : 6dll.1 (1 other biounit)

2.2 Angstrom Resolution Crystal Structure of P-Hydroxybenzoate Hydroxylase from Pseudomonas putida in Complex with FAD.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 27 residues within 4Å: Chain A: I.11, G.12, G.14, P.15, S.16, V.34, E.35, R.36, Q.37, V.42, R.45, R.47, A.48, Q.105, V.130, C.161, D.162, G.163, H.165, G.166, I.167, Y.225, G.288, D.289, P.296, G.301, L.302 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:R.47 Hydrogen bonds: A:S.16, A:S.16, A:S.16, A:R.36, A:R.36, A:R.45, A:R.45, A:R.47, A:A.48, A:Q.105, A:Q.105, A:I.167, A:D.289 Water bridges: A:G.14, A:G.17, A:R.47, A:R.47, A:G.49, A:V.50, A:V.130, A:G.163, A:F.164, A:F.164, A:G.166, A:D.289, A:A.290, A:K.300, A:A.305 Salt bridges: A:R.45, A:R.47 FAD.3: 26 residues within 4Å: Chain B: I.11, G.12, G.14, P.15, S.16, V.34, E.35, R.36, Q.37, V.42, R.45, R.47, A.48, Q.105, V.130, C.161, D.162, G.163, G.166, I.167, Y.225, G.288, D.289, P.296, G.301, L.302 32 PLIP interactions: 32 interactions with chain B Hydrophobic interactions: B:R.47 Hydrogen bonds: B:S.16, B:S.16, B:S.16, B:R.36, B:R.45, B:R.45, B:R.47, B:A.48, B:Q.105, B:Q.105, B:I.167, B:D.289 Water bridges: B:G.14, B:G.17, B:R.36, B:R.36, B:R.45, B:R.47, B:R.47, B:G.49, B:V.50, B:V.130, B:V.130, B:G.163, B:D.289, B:D.289, B:D.289, B:A.290, B:K.300, B:A.305 Salt bridges: B:R.47

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.338, G.391, L.392 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain B: Q.330, A.398 Ligand excluded by PLIP CL.5: 6 residues within 4Å: Chain B: R.47, A.48, G.104, Q.105, T.106, R.217 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain B: K.300, R.338, G.391, L.392 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain B: R.344, F.348, N.388 Ligand excluded by PLIP

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.7: 4 residues within 4Å: Chain A: A.380, V.383 Chain B: A.380, V.383 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lazar, J.T. et al., Structural comparison of p-hydroxybenzoate hydroxylase (PobA) from Pseudomonas putida with PobA from other Pseudomonas spp. and other monooxygenases. Acta Crystallogr.,Sect.F (2019)

Release Date

2018-06-13

Peptides

p-hydroxybenzoate hydroxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

p-hydroxybenzoate hydroxylase

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