SMTL ID : 6dps.6 (6 other biounits)

Crystal Structure of Neisseria meningitidis DsbD n-terminal domain in the oxidised form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 4 residues within 4Å: Chain A: Y.35, K.62, H.74, E.102 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.74, A:E.102 ZN.2: 2 residues within 4Å: Chain A: D.32, H.75 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.75 ZN.3: 2 residues within 4Å: Chain A: H.74, H.75 No protein-ligand interaction detected (PLIP) ZN.4: 2 residues within 4Å: Chain A: E.16, H.123 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.16, A:H.123 ZN.5: 1 residues within 4Å: Chain A: E.113 No protein-ligand interaction detected (PLIP) ZN.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, R.P. et al., Structural and biochemical insights into the disulfide reductase mechanism of DsbD, an essential enzyme for neisserial pathogens. J. Biol. Chem. (2018)

Release Date

2018-09-12

Peptides

Thiol:disulfide interchange protein DsbD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Thiol:disulfide interchange protein DsbD

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