SMTL ID : 6e4a.2 (1 other biounit)

Crystal structure of human BRD4(1) in complex with CN750

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.26 Å

Oligo State

monomer

Ligands

1 x HRY: 5-(4-{[(3-chlorophenyl)methyl]amino}-2-{4-[2-(dimethylamino)ethyl]piperazin-1-yl}quinazolin-6-yl)-1-methylpyridin-2(1H)-one(Non-covalent)

HRY.1: 8 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, N.99, I.105, M.108 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.41, A:L.51, A:L.51, A:I.105 Hydrogen bonds: A:N.99 pi-Stacking: A:W.40

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, T.93, N.94, I.97 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.61, A:T.62, A:T.62 Water bridges: A:I.59, A:T.93 GOL.3: 1 residues within 4Å: Chain A: K.31 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, S.M. et al., Discovery and lead identification of quinazoline-based BRD4 inhibitors. Bioorg. Med. Chem. Lett. (2018)

Release Date

2018-09-12

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bromodomain-containing protein 4

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