SMTL ID : 6emh.1 (3 other biounits)

Crystal structure of JNK3 in complex with a pyridinylimidazole inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

monomer

Ligands

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 3 residues within 4Å: Chain A: K.163, S.164, C.166 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.164 BME.2: 5 residues within 4Å: Chain A: C.119, P.157, T.191, Y.194, E.220 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.194

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: L.26, K.27, R.28 Ligand excluded by PLIP

1 x BGE: 4-(4-methyl-1~{H}-imidazol-5-yl)-~{N}-(4-morpholin-4-ylphenyl)pyridin-2-amine(Non-covalent)

BGE.4: 13 residues within 4Å: Chain A: I.35, V.43, A.56, M.111, E.112, L.113, M.114, D.115, A.116, N.117, Q.120, V.161, L.171 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.35, A:A.56, A:V.161, A:L.171 Hydrogen bonds: A:M.114, A:M.114

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 6 residues within 4Å: Chain A: E.129, R.130, Y.133, D.165, C.166, W.327 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.129

1 x C15: N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE(Non-covalent)

C15.6: 11 residues within 4Å: Chain A: G.180, T.181, I.200, L.201, G.202, M.203, G.204, Y.205, I.234, Q.256, V.259 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.201, A:I.234, A:V.259 Hydrogen bonds: A:T.181, A:G.204 Water bridges: A:S.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ansideri, F. et al., Structural Optimization of a Pyridinylimidazole Scaffold: Shifting the Selectivity from p38 alpha Mitogen-Activated Protein Kinase to c-Jun N-Terminal Kinase 3. ACS Omega (2018)

Release Date

2018-08-08

Peptides

Mitogen-activated protein kinase 10: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 10

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