SMTL ID : 6eor.1 (1 other biounit)

DPP9 - 1G244

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x 9XH: (2~{S})-2-azanyl-4-[4-[bis(4-fluorophenyl)methyl]piperazin-1-yl]-1-(1,3-dihydroisoindol-2-yl)butane-1,4-dione(Non-covalent)

9XH.1: 15 residues within 4Å: Chain A: R.133, E.248, E.249, Y.644, Q.648, K.660, S.730, Y.731, V.756, W.759, Y.762, Y.766, N.810, V.811, H.840 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:R.133, A:R.133, A:Y.731, A:V.756, A:W.759, A:Y.766, A:V.811 Hydrogen bonds: A:R.133, A:Y.762, A:Y.762, A:N.810 pi-Stacking: A:H.500 9XH.2: 16 residues within 4Å: Chain B: R.133, E.248, E.249, H.500, Y.644, P.647, Q.648, S.730, Y.731, V.756, W.759, Y.762, Y.766, N.810, V.811, H.840 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:R.133, B:Y.731, B:V.756, B:W.759, B:Y.766, B:V.811 Hydrogen bonds: B:Y.762, B:Y.762, B:N.810 pi-Stacking: B:H.500

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ross, B. et al., Structures and mechanism of dipeptidyl peptidases 8 and 9, important players in cellular homeostasis and cancer. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-02-07

Peptides

Dipeptidyl peptidase 9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dipeptidyl peptidase 9

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