- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.72 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 4 residues within 4Å:- Chain A: G.204, E.206, G.272
- Ligands: AMP.1
6 PLIP interactions:5 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: H2O.1, H2O.3, H2O.3, H2O.6, H2O.23, AMP.1
MG.11: 4 residues within 4Å:- Chain B: G.204, E.206, G.272
- Ligands: AMP.10
6 PLIP interactions:5 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: H2O.9, H2O.15, H2O.17, H2O.17, H2O.20, AMP.10
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 9 residues within 4Å:- Chain A: V.52, G.171, E.172, R.173, G.351, W.352, T.353, S.354
- Chain B: S.445
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:G.351, A:T.353, A:S.354, A:S.354
- Water bridges: A:T.353
EDO.4: 10 residues within 4Å:- Chain A: G.175, A.176, S.177, E.178
- Chain B: L.335, M.411, R.412, S.413, A.414, S.439
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:A.176, A:S.177, B:S.413
- Water bridges: A:R.173, A:S.177, B:A.414
EDO.5: 8 residues within 4Å:- Chain A: K.299, P.300, G.301, K.302, N.330, S.333, R.374, S.405
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.374, A:S.405, A:S.405
- Water bridges: A:S.333, A:S.333
EDO.6: 7 residues within 4Å:- Chain A: R.249, G.276, D.277, R.278, D.279, F.280, P.283
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.277
EDO.12: 9 residues within 4Å:- Chain A: S.445
- Chain B: V.52, G.171, E.172, R.173, G.351, W.352, T.353, S.354
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.351, B:T.353, B:S.354, B:S.354
- Water bridges: B:T.353
EDO.13: 10 residues within 4Å:- Chain A: L.335, M.411, R.412, S.413, A.414, S.439
- Chain B: G.175, A.176, S.177, E.178
6 PLIP interactions:2 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: A:S.413, B:A.176, B:S.177
- Water bridges: A:A.414, B:R.173, B:S.177
EDO.14: 8 residues within 4Å:- Chain B: K.299, P.300, G.301, K.302, N.330, S.333, R.374, S.405
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.374, B:S.405, B:S.405
- Water bridges: B:S.333, B:S.333
EDO.15: 7 residues within 4Å:- Chain B: R.249, G.276, D.277, R.278, D.279, F.280, P.283
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.277
- 6 x ACE: ACETYL GROUP(Non-functional Binders)
ACE.7: 4 residues within 4Å:- Chain A: I.42, E.55, M.189, K.191
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:I.42
ACE.8: 4 residues within 4Å:- Chain A: V.229, M.233, V.239
- Chain B: Y.46
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:V.229
ACE.9: 5 residues within 4Å:- Chain A: V.208, A.212, L.215, G.216, Q.219
No protein-ligand interaction detected (PLIP)ACE.16: 4 residues within 4Å:- Chain B: I.42, E.55, M.189, K.191
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.42
ACE.17: 4 residues within 4Å:- Chain A: Y.46
- Chain B: V.229, M.233, V.239
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:V.229
ACE.18: 5 residues within 4Å:- Chain B: V.208, A.212, L.215, G.216, Q.219
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Krausze, J. et al., The functional principle of eukaryotic molybdenum insertases. Biochem. J. (2018)
- Release Date
- 2018-07-18
- Peptides
- Molybdopterin biosynthesis protein CNX1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.72 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 6 x ACE: ACETYL GROUP(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Krausze, J. et al., The functional principle of eukaryotic molybdenum insertases. Biochem. J. (2018)
- Release Date
- 2018-07-18
- Peptides
- Molybdopterin biosynthesis protein CNX1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A