SMTL ID : 6ff8.1 (1 other biounit)

Crystal structure of uncomplexed Rab32 in the active GTP-bound state at 2.13 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 25 residues within 4Å: Chain A: E.16, L.17, G.18, V.19, G.20, K.21, T.22, S.23, F.33, S.34, Q.35, H.36, Y.37, A.39, T.40, A.66, G.67, N.126, K.127, D.129, Q.130, S.157, A.158, K.159 Ligands: MG.2 26 PLIP interactions: 26 interactions with chain A Hydrogen bonds: A:E.16, A:G.18, A:V.19, A:G.20, A:K.21, A:T.22, A:S.23, A:S.23, A:S.34, A:Y.37, A:R.38, A:T.40, A:G.67, A:N.126, A:K.127, A:A.158, A:K.159 Water bridges: A:T.40, A:T.40, A:T.40, A:K.127 Salt bridges: A:K.21, A:K.21, A:D.129 pi-Stacking: A:F.33, A:F.33

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.22, T.40, D.64 Ligands: GTP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.22, A:T.40, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McGrath, E. et al., LRRK2 binds to the Rab32 subfamily in a GTP-dependent mannerviaits armadillo domain. Small GTPases (2019)

Release Date

2019-01-30

Peptides

Ras-related protein Rab-32: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ras-related protein Rab-32

Related Entries With Identical Sequence