SMTL ID : 6fv5.1

QTRT2, the non-catalytic subunit of murine tRNA-Guanine Transglycosylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.357, C.359, C.362, H.388 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.357, A:C.359, A:C.362, A:H.388 ZN.4: 4 residues within 4Å: Chain B: C.357, C.359, C.362, H.388 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.357, B:C.359, B:C.362, B:H.388

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: C.362, K.363, N.364, H.365 Ligands: MLI.3 No protein-ligand interaction detected (PLIP)

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.3: 4 residues within 4Å: Chain A: F.350, T.366 Chain B: Y.83 Ligands: PEG.2 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:T.366 Water bridges: B:Y.83 Salt bridges: B:K.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Behrens, C. et al., Homodimer Architecture of QTRT2, the Noncatalytic Subunit of the Eukaryotic tRNA-Guanine Transglycosylase. Biochemistry (2018)

Release Date

2018-06-13

Peptides

Queuine tRNA-ribosyltransferase accessory subunit 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Queuine tRNA-ribosyltransferase accessory subunit 2