- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- monomer
- Ligands
- 1 x HEC: HEME C(Covalent)
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
EVB.2: 9 residues within 4Å:- Chain A: K.16, T.17, L.20, Q.21, T.24, E.26, P.30, H.31, K.32
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:L.20, A:L.20, A:L.20, A:L.20, A:L.20, A:Q.21, A:T.24, A:P.30, A:P.30, A:P.30
- Hydrogen bonds: A:L.20, A:Q.21, A:K.32, A:K.32, A:K.32
- Salt bridges: A:K.16
EVB.3: 11 residues within 4Å:- Chain A: A.5, G.6, A.8, K.9, A.12, T.101, Y.102, K.104, K.105
- Ligands: SPM.14, SPM.15
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:A.5, A:K.9, A:A.12, A:T.101, A:Y.102, A:K.105, A:K.105
- Hydrogen bonds: A:G.6, A:A.8, A:K.105
- Salt bridges: A:K.9, A:K.104, A:K.105
- pi-Stacking: A:Y.102
- pi-Cation interactions: A:K.105
EVB.4: 12 residues within 4Å:- Chain A: R.18, T.74, N.75, K.77, K.78, P.81, G.82, F.87, G.88, G.89, L.90, K.91
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:K.77, A:K.77, A:K.91, A:K.91
- Hydrogen bonds: A:N.75, A:G.82, A:G.88, A:K.91
- Salt bridges: A:R.18, A:R.18, A:K.77, A:K.78, A:K.91
- pi-Cation interactions: A:K.91
- 9 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 2 residues within 4Å:- Chain A: T.54, D.55
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.55
SO4.6: 2 residues within 4Å:- Chain A: K.27, H.38
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:K.27, A:H.38
SO4.7: 1 residues within 4Å:- Chain A: R.43
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.43
SO4.8: 2 residues within 4Å:- Chain A: E.49, G.50
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.49, A:G.50
SO4.9: 4 residues within 4Å:- Chain A: K.91, K.92, E.93
- Ligands: SO4.11
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.91, A:E.93
SO4.10: 1 residues within 4Å:- Chain A: K.60
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:K.60
SO4.11: 5 residues within 4Å:- Chain A: A.1, E.2, E.93, R.96
- Ligands: SO4.9
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:A.1, A:A.1, A:E.2
- Salt bridges: A:R.96
SO4.12: 1 residues within 4Å:- Ligands: SPM.14
No protein-ligand interaction detected (PLIP)SO4.13: 1 residues within 4Å:- Ligands: SPM.15
No protein-ligand interaction detected (PLIP)- 2 x SPM: SPERMINE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engilberge, S. et al., Tuning Protein Frameworks via Auxiliary Supramolecular Interactions. Acs Nano (2019)
- Release Date
- 2019-05-01
- Peptides
- Cytochrome c iso-1: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- monomer
- Ligands
- 1 x HEC: HEME C(Covalent)
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
- 9 x SO4: SULFATE ION(Non-functional Binders)
- 2 x SPM: SPERMINE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engilberge, S. et al., Tuning Protein Frameworks via Auxiliary Supramolecular Interactions. Acs Nano (2019)
- Release Date
- 2019-05-01
- Peptides
- Cytochrome c iso-1: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A