SMTL ID : 6gkj.2 (3 other biounits)

Translation initiation factor 4E in complex with trinucleotide mRNA 5' cap (m7GpppApG)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x MGP: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

MGP.1: 6 residues within 4Å: Chain A: W.29, M.74, W.75, E.76, R.130, K.135 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:W.75 Water bridges: A:R.85, A:R.85, A:R.85, A:R.85, A:R.85, A:R.85, A:N.128, A:R.130, A:R.130, A:R.130 Salt bridges: A:E.76, A:R.130, A:R.130, A:K.135, A:K.135, A:K.135 pi-Stacking: A:W.29, A:W.29, A:W.29, A:W.75, A:W.75

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: T.89, Q.94, L.162, I.168 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.89, A:T.89, A:Q.94 Water bridges: A:L.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Warminski, M. et al., Translation initiation factor 4E in complex with trinucleotide mRNA 5' cap (m7GpppApG). To Be Published

Release Date

2019-06-19

Peptides

Eukaryotic translation initiation factor 4E: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Eukaryotic translation initiation factor 4E

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