SMTL ID : 6go1.1 (1 other biounit)

Crystal Structure of a Bacillus anthracis peptidoglycan deacetylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.163, D.164, H.222, H.226 Ligands: ACT.2 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:D.164, A:H.222, A:H.226, H2O.1, ACT.2

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: H.106, D.163, H.222, H.226, P.260, V.261 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.261 Salt bridges: A:H.106, A:H.222, A:H.226

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: D.118, Y.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.118, A:Y.119 EDO.4: 2 residues within 4Å: Chain A: N.149, R.153 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.149, A:R.153, A:R.153 Water bridges: A:N.149

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: K.130, S.309, M.310, E.311 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.310, A:E.311 Salt bridges: A:K.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andreou, A. et al., The putative polysaccharide deacetylase Ba0331: cloning, expression, crystallization and structure determination. Acta Crystallogr.,Sect.F (2019)

Release Date

2019-04-10

Peptides

Polysaccharide deacetylase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polysaccharide deacetylase-like protein

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