SMTL ID : 6go2.1

Carboxypeptidase T with N-sulfamoyl-L-Leucine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.69, E.72, H.204, T.205 Ligands: LU0.7 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.69, A:E.72, A:E.72, A:H.204

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: S.7, Y.9, E.14 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.7, A:Y.9, A:E.14, H2O.5, H2O.9 CA.3: 4 residues within 4Å: Chain A: S.50, D.51, E.57, E.59 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.50, A:D.51, A:E.57, A:E.59, H2O.3 CA.4: 3 residues within 4Å: Chain A: Y.5, D.291, E.292 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.5, A:D.291, A:E.292, A:E.292, H2O.5 CA.5: 6 residues within 4Å: Chain A: D.56, E.57, E.59, E.61, E.104, R.189 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.56, A:E.57, A:E.61, A:E.104, H2O.1, H2O.7

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 5 residues within 4Å: Chain A: F.174, R.183, N.187, W.264, Q.268 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.187, A:W.264 Water bridges: A:R.183, A:Q.268

1 x LU0: Sulphamoil Leucine(Non-covalent)

LU0.7: 14 residues within 4Å: Chain A: H.69, E.72, R.129, N.146, R.147, H.204, T.205, L.211, L.254, Y.255, T.257, T.275, E.277 Ligands: ZN.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.211, A:L.254, A:T.257, A:T.275 Hydrogen bonds: A:R.129, A:R.129, A:N.146, A:Y.255, A:Y.255, A:E.277, A:E.277 Salt bridges: A:H.69, A:R.129, A:R.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Timofeev, V.I. et al., Carboxypeptidase T with N-sulfamoyl-L-Leucine. To Be Published

Release Date

2018-06-13

Peptides

Carboxypeptidase T: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carboxypeptidase T

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