SMTL ID : 6gvz.1

GII.1 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

1 x CHO: GLYCOCHENODEOXYCHOLIC ACID(Non-covalent)

CHO.1: 14 residues within 4Å: Chain A: H.79, Q.80, N.111, G.130, V.131, A.133, W.135, S.136, P.137, I.147, G.149, T.150, W.151, F.170 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Q.80, A:V.131, A:A.133, A:W.135, A:I.147, A:F.170 Water bridges: A:Q.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kilic, T. et al., Structural Basis for Human Norovirus Capsid Binding to Bile Acids. J. Virol. (2019)

Release Date

2018-10-17

Peptides

Capsid protein VP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Capsid protein VP1

Related Entries With Identical Sequence