SMTL ID : 6gxe.1

Carbonic Anhydrase CAIX mimic in complex with inhibitor JS14

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.91, H.93, E.103, H.116, T.195 Ligands: FFH.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.91, A:H.93, A:H.116

2 x FFH: 3-[2-[2-[2-[2-(aminomethyloxy)ethoxy]ethoxy]ethoxy]ethoxy]-~{N}-[4-[4-[(4-sulfamoylphenyl)carbamoylamino]phenoxy]butyl]propanamide(Non-covalent)

FFH.2: 13 residues within 4Å: Chain A: Q.89, H.91, H.93, H.116, V.118, V.131, V.139, L.194, T.195, T.196, P.198, W.205 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.118, A:V.118, A:V.131, A:L.194, A:L.194, A:P.198 Hydrogen bonds: A:T.195, A:T.195 FFH.3: 9 residues within 4Å: Chain A: H.1, W.2, H.7, N.8, H.12, W.13, K.15, D.16, F.17 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:H.1, A:N.8 Hydrogen bonds: A:W.13, A:D.16, A:D.16 Water bridges: A:W.2

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 4 residues within 4Å: Chain A: Y.4, D.239, W.241, P.243 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.239 pi-Cation interactions: A:W.241, A:W.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pospisilova, K. et al., Inhibitor-Polymer Conjugates as a Versatile Tool for Detection and Visualization of Cancer-Associated Carbonic Anhydrase Isoforms. Acs Omega (2019)

Release Date

2019-05-08

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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