- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 6 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
- 3 x FUQ: Mo5 Cluster(Non-covalent)
FUQ.2: 5 residues within 4Å:- Chain A: D.107, K.152
- Chain B: P.130
- Ligands: 8M0.1, 8M0.18
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.107, A:D.107, A:K.152
FUQ.12: 5 residues within 4Å:- Chain C: D.107, K.152
- Chain D: P.130
- Ligands: 8M0.11, 8M0.28
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:D.107, C:D.107, C:K.152
FUQ.22: 5 residues within 4Å:- Chain E: D.107, K.152
- Chain F: P.130
- Ligands: 8M0.8, 8M0.21
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:D.107, E:D.107, E:K.152
- 3 x GX2: Mo14O47 cluster(Non-covalent)
GX2.3: 12 residues within 4Å:- Chain A: P.123, V.124, V.125, G.126, S.131, V.133, P.134
- Chain C: V.133
- Chain E: P.123, V.133
- Ligands: GX2.13, GX2.23
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.126, A:S.131, A:S.131, A:S.131
GX2.13: 12 residues within 4Å:- Chain A: P.123, V.133
- Chain C: P.123, V.124, V.125, G.126, S.131, V.133, P.134
- Chain E: V.133
- Ligands: GX2.3, GX2.23
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:V.124, C:G.126, C:S.131, C:S.131, C:S.131
GX2.23: 12 residues within 4Å:- Chain A: V.133
- Chain C: P.123, V.133
- Chain E: P.123, V.124, V.125, G.126, S.131, V.133, P.134
- Ligands: GX2.3, GX2.13
5 PLIP interactions:5 interactions with chain E- Hydrogen bonds: E:V.124, E:G.126, E:S.131, E:S.131, E:S.131
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 3 residues within 4Å:- Chain A: E.241, H.261
- Ligands: PO4.5
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.241
- Water bridges: A:G.259
- Salt bridges: A:H.261
PO4.5: 3 residues within 4Å:- Chain A: R.209, E.241
- Ligands: PO4.4
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.209
PO4.14: 3 residues within 4Å:- Chain C: E.241, H.261
- Ligands: PO4.15
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:E.241
- Water bridges: C:G.259
- Salt bridges: C:H.261
PO4.15: 3 residues within 4Å:- Chain C: R.209, E.241
- Ligands: PO4.14
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:R.209
PO4.24: 3 residues within 4Å:- Chain E: E.241, H.261
- Ligands: PO4.25
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:E.241
- Water bridges: E:G.259
- Salt bridges: E:H.261
PO4.25: 3 residues within 4Å:- Chain E: R.209, E.241
- Ligands: PO4.24
1 PLIP interactions:1 interactions with chain E- Salt bridges: E:R.209
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.6: 22 residues within 4Å:- Chain B: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226
- Ligands: MG.7
21 PLIP interactions:21 interactions with chain B- Hydrogen bonds: B:G.46, B:G.47, B:R.48, B:A.79, B:G.80, B:R.84, B:N.190, B:N.190, B:Y.195, B:Y.195, B:N.200, B:N.200
- Water bridges: B:K.44, B:K.44, B:V.49, B:V.49, B:D.170, B:D.170, B:E.189
- Salt bridges: B:K.44, B:K.44
ATP.16: 22 residues within 4Å:- Chain D: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226
- Ligands: MG.17
21 PLIP interactions:21 interactions with chain D- Hydrogen bonds: D:G.46, D:G.47, D:R.48, D:A.79, D:G.80, D:R.84, D:N.190, D:N.190, D:Y.195, D:Y.195, D:N.200, D:N.200
- Water bridges: D:K.44, D:K.44, D:V.49, D:V.49, D:D.170, D:D.170, D:E.189
- Salt bridges: D:K.44, D:K.44
ATP.26: 22 residues within 4Å:- Chain F: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226
- Ligands: MG.27
21 PLIP interactions:21 interactions with chain F- Hydrogen bonds: F:G.46, F:G.47, F:R.48, F:A.79, F:G.80, F:R.84, F:N.190, F:N.190, F:Y.195, F:Y.195, F:N.200, F:N.200
- Water bridges: F:K.44, F:K.44, F:V.49, F:V.49, F:D.170, F:D.170, F:E.189
- Salt bridges: F:K.44, F:K.44
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.7: 4 residues within 4Å:- Chain B: D.170, E.189, P.226
- Ligands: ATP.6
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.189, B:P.226, H2O.6, H2O.7
MG.17: 4 residues within 4Å:- Chain D: D.170, E.189, P.226
- Ligands: ATP.16
4 PLIP interactions:2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.189, D:P.226, H2O.15, H2O.17
MG.27: 4 residues within 4Å:- Chain F: D.170, E.189, P.226
- Ligands: ATP.26
4 PLIP interactions:2 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.189, F:P.226, H2O.25, H2O.26
- 3 x MOO: MOLYBDATE ION(Non-covalent)
MOO.9: 9 residues within 4Å:- Chain B: T.131, Q.135, H.139
- Chain D: H.139
- Chain F: Q.135, I.138, H.139
- Ligands: MOO.19, MOO.29
2 PLIP interactions:1 interactions with chain F, 1 interactions with chain D- Water bridges: F:Q.135
- Hydrogen bonds: D:H.139
MOO.19: 9 residues within 4Å:- Chain B: Q.135, I.138, H.139
- Chain D: T.131, Q.135, H.139
- Chain F: H.139
- Ligands: MOO.9, MOO.29
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain F- Water bridges: B:Q.135
- Hydrogen bonds: F:H.139
MOO.29: 9 residues within 4Å:- Chain B: H.139
- Chain D: Q.135, I.138, H.139
- Chain F: T.131, Q.135, H.139
- Ligands: MOO.9, MOO.19
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain B- Water bridges: D:Q.135
- Hydrogen bonds: B:H.139
- 3 x M27: bis(mu2-oxo)-octaoxo-dimolybdenum (VI)(Non-covalent)
M27.10: 5 residues within 4Å:- Chain B: E.128, P.130, T.131
- Ligands: M27.20, M27.30
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain B- Water bridges: F:Q.135
- Hydrogen bonds: B:T.131, B:T.131, B:T.131
M27.20: 5 residues within 4Å:- Chain D: E.128, P.130, T.131
- Ligands: M27.10, M27.30
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain D- Water bridges: B:Q.135
- Hydrogen bonds: D:T.131, D:T.131, D:T.131
M27.30: 5 residues within 4Å:- Chain F: E.128, P.130, T.131
- Ligands: M27.10, M27.20
4 PLIP interactions:1 interactions with chain D, 3 interactions with chain F- Water bridges: D:Q.135
- Hydrogen bonds: F:T.131, F:T.131, F:T.131
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brunle, S. et al., The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters. J. Inorg. Biochem. (2018)
- Release Date
- 2018-11-14
- Peptides
- Molybdenum storage protein subunit beta: ACE
Molybdenum storage protein subunit alpha: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BB
AD
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 6 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
- 3 x FUQ: Mo5 Cluster(Non-covalent)
- 3 x GX2: Mo14O47 cluster(Non-covalent)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x MOO: MOLYBDATE ION(Non-covalent)
- 3 x M27: bis(mu2-oxo)-octaoxo-dimolybdenum (VI)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brunle, S. et al., The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters. J. Inorg. Biochem. (2018)
- Release Date
- 2018-11-14
- Peptides
- Molybdenum storage protein subunit beta: ACE
Molybdenum storage protein subunit alpha: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BB
AD
AF
A