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SMTL ID : 6hgs.2
(1 other biounit)
Crystal Structure of Human APRT wild type in complex with GMP
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.55 Å
Oligo State
homo-dimer
Ligands
2 x
5GP
:
GUANOSINE-5'-MONOPHOSPHATE
(Non-covalent)
5GP.1:
11 residues within 4Å:
Chain A:
F.24
,
R.25
,
R.65
,
D.125
,
D.126
,
L.127
,
A.129
,
T.130
,
G.131
,
G.132
,
T.133
21
PLIP interactions
:
21 interactions with chain A
Hydrogen bonds:
A:R.25
,
A:R.25
,
A:R.65
,
A:R.65
,
A:D.125
,
A:A.129
,
A:T.130
,
A:T.130
,
A:T.130
,
A:G.131
,
A:G.132
,
A:T.133
,
A:T.133
Water bridges:
A:I.27
,
A:S.64
,
A:R.65
,
A:R.65
,
A:T.130
,
A:T.130
,
A:M.134
Salt bridges:
A:D.126
5GP.2:
11 residues within 4Å:
Chain B:
F.24
,
R.25
,
R.65
,
D.125
,
D.126
,
L.127
,
A.129
,
T.130
,
G.131
,
G.132
,
T.133
21
PLIP interactions
:
21 interactions with chain B
Hydrogen bonds:
B:R.25
,
B:R.25
,
B:R.65
,
B:R.65
,
B:D.125
,
B:D.125
,
B:A.129
,
B:T.130
,
B:T.130
,
B:T.130
,
B:G.131
,
B:G.132
,
B:T.133
,
B:T.133
Water bridges:
B:I.27
,
B:R.65
,
B:R.65
,
B:T.130
,
B:T.130
,
B:M.134
Salt bridges:
B:D.126
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Ozeir, M. et al., Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction. J.Biol.Chem. (2019)
Release Date
2019-07-31
Peptides
Adenine phosphoribosyltransferase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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Secondary Structure
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Adenine phosphoribosyltransferase
Related Entries With Identical Sequence
6fch.1
|
6fcl.1
|
6hgp.1
|
6hgr.1
|
6hgs.1
Cartoon
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